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The map label for this gene is recO

Identifier: 15836121

GI number: 15836121

Start: 677961

End: 678719

Strand: Direct

Name: recO

Synonym: CPj0589

Alternate gene names: 15836121

Gene position: 677961-678719 (Clockwise)

Preceding gene: 15836120

Following gene: 15836123

Centisome position: 55.27

GC content: 41.37

Gene sequence:

>759_bases
ATGCAGATCTGTGTTACCGGCGTTGTACTTCGCAGCCGCCCCTTAGGAAAAAATCATACACTCACCACTTTATTTACCCC
TGAAGGACTCTTTACCTTTTTTGCAAAGCAAGGACAAACCCTCCAATGTGATTATCGAGAAACCCTTGTCCCCATATCTT
TGGGGAAGTATACGTTACATCGTAATGGCTCACGCCTTCCTAAACTGACCCACGGGGATATCCTCAATGCCTTCGAAGCA
ATCAAACAAACCTACGCTCTCCTAGAAGCTAGTGGAAAAATGATTCAAGCTCTTCTGGCTTCTCAGTGGAAAGAAAAGCC
TTCGCATAAGCTCTTCTCTTTATTCTTGAATTTCCTCCACCGTATTCCTGAAAGCAGCAATCCAGAATTTTTTGCAGCCA
TCTTTGTACTTAAACTTCTCCAATACGAAGGAATCCTAGACCTGACTCCAGCATGTTCGCTATGCAAAGCATCTCTACCC
TATGCCTGCTATCGCTACCAAGGCCATAAACTATGTAAGAAACATCAGCATAAACAAGCCATCTCCATCGAGAAAGAAGA
AGAACAAATCTTACAGGCTATCATTCATGCGAAGCAGTTTTCTGAACTTCTAGCTATTGCAGAATTCCCGATTGCTATAG
CTGAAAAAATTTTTTATTTGTTTGACTCGCTACAAGAGGAAAAAAAATCAGAAAGAAATTCTTCGGAAGATCCATATCAT
GAAATCCTAAGACTTTCTAAAGTAGTCCATCCCTACTGA

Upstream 100 bases:

>100_bases
TTCAATCCAAAAACACAAACTCTTGATTTTTATCCTGGCCTCCCAGAGTATTCCCAACTCCTAAACTACTTTATTTCTTT
AAACTTATAGCTAATCATCC

Downstream 100 bases:

>100_bases
TGAAGGACGTGTAGGCCCCTAGAAATTATAATTATCAAAGGTACCGCTGCACCAAACCTTTGAAAAAAGGTGTGTTTTCC
TAGAATTCAAGAAAAATTGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLVPISLGKYTLHRNGSRLPKLTHGDILNAFEA
IKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFLHRIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLP
YACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQFSELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYH
EILRLSKVVHPY

Sequences:

>Translated_252_residues
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLVPISLGKYTLHRNGSRLPKLTHGDILNAFEA
IKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFLHRIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLP
YACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQFSELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYH
EILRLSKVVHPY
>Mature_252_residues
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLVPISLGKYTLHRNGSRLPKLTHGDILNAFEA
IKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFLHRIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLP
YACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQFSELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYH
EILRLSKVVHPY

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_CHLPN (Q9Z7W5)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   B86564
- PIR:   E72060
- RefSeq:   NP_224785.1
- RefSeq:   NP_300645.1
- RefSeq:   NP_444711.1
- RefSeq:   NP_876885.1
- ProteinModelPortal:   Q9Z7W5
- GeneID:   1467292
- GeneID:   895380
- GeneID:   919350
- GeneID:   962985
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0159
- KEGG:   cpj:CPj0589
- KEGG:   cpn:CPn0589
- KEGG:   cpt:CpB0613
- TIGR:   CP_0159
- HOGENOM:   HBG414088
- OMA:   LQYEGIL
- ProtClustDB:   PRK00085
- BioCyc:   CPNE115711:CP_0159-MONOMER
- BioCyc:   CPNE115713:CPN0589-MONOMER
- BioCyc:   CPNE138677:CPJ0589-MONOMER
- BioCyc:   CPNE182082:CPB0613-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28854; Mature: 28854

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLVPISLGKYTLH
CCEEEEEHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEECHHHHEEEHCCCCEEEC
RNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFLH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLPYACYRYQGHKLCKKHQHKQA
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ISIEKEEEQILQAIIHAKQFSELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EILRLSKVVHPY
HHHHHHHHHCCC
>Mature Secondary Structure
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLVPISLGKYTLH
CCEEEEEHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEECHHHHEEEHCCCCEEEC
RNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFLH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLPYACYRYQGHKLCKKHQHKQA
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ISIEKEEEQILQAIIHAKQFSELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EILRLSKVVHPY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362