Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15836109

GI number: 15836109

Start: 667216

End: 667479

Strand: Direct

Name: Not Available

Synonym: CPj0577

Alternate gene names: NA

Gene position: 667216-667479 (Clockwise)

Preceding gene: 15836108

Following gene: 15836110

Centisome position: 54.4

GC content: 35.98

Gene sequence:

>264_bases
ATGAGTCAAAAAAATAAAAACTCTGCTTTTATGCATCCCGTGAATATTTCCACAGATTTAGCAGTTATAGTTGGCAAGGG
ACCTATGCCCAGAACCGAAATTGTAAAGAAAGTTTGGGAATACATTAAAAAACACAACTGTCAGGATCAAAAAAATAAAC
GTAATATCCTTCCCGATGCGAATCTTGCCAAAGTCTTTGGCTCTAGTGATCCTATCGACATGTTCCAAATGACCAAAGCC
CTTTCCAAACATATTGTAAAATAA

Upstream 100 bases:

>100_bases
AATTCCACTTTTTTGTTTTGACGAGAAACCTCTCTGAGAGATAAAAAAGTTGGGATGAAGAGCTCAGGTCTCTTCTTACC
ACCTTTACTAGGAGTCACCA

Downstream 100 bases:

>100_bases
GGAATTTGTTCGCTGTTGACTTAGGCTTAAGAAAGCATGAGCTCTCATTCTGATATGTTAAGTACCCTGCCCTTTAGGGC
GGGGATATAAAGTGATCTTT

Product: SWIB (YM74) complex protein

Products: NA

Alternate protein names: SWIB/MDM2 Domain Protein; Fused DNA poisomerase I/SWI Domain-Containing Protein; DNA poisomerase III; SwiB Complex Protein; DNA poisomerase Domain-Containing Protein; SWIB Complex; DNA poisomerase I; SWIB/MDM2 Domain Superfamily; SWIB Complex Protein

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFGSSDPIDMFQMTKA
LSKHIVK

Sequences:

>Translated_87_residues
MSQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFGSSDPIDMFQMTKA
LSKHIVK
>Mature_86_residues
SQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFGSSDPIDMFQMTKAL
SKHIVK

Specific function: Unknown

COG id: COG5531

COG function: function code B; SWIB-domain-containing proteins implicated in chromatin remodeling

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323889, Length=81, Percent_Identity=38.2716049382716, Blast_Score=66, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6324869, Length=74, Percent_Identity=40.5405405405405, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9880; Mature: 9749

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDA
CCCCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NLAKVFGSSDPIDMFQMTKALSKHIVK
HHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQKNKNSAFMHPVNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDA
CCCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NLAKVFGSSDPIDMFQMTKALSKHIVK
HHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA