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The map label for this gene is recJ

Identifier: 15836094

GI number: 15836094

Start: 647611

End: 649377

Strand: Reverse

Name: recJ

Synonym: CPj0563

Alternate gene names: 15836094

Gene position: 649377-647611 (Counterclockwise)

Preceding gene: 15836095

Following gene: 15836093

Centisome position: 52.94

GC content: 43.35

Gene sequence:

>1767_bases
ATGACAAATTCAGATAATGCTTCTGCAGCAGGATTGCTCTGGGCTCATCCCAAGGAAGATCCTGCGTTTCTTGGAATGAT
TATCAAAGAATTTCACTTGCCTCCCACAGTGGCTCAGATTTTTATCTCAAGAGGATTCCAAACGATTCAGGAAATCCATA
AGTTCTTATACAGCCATCTGTCGAGCCTTTATGATCCTGGACTCTTCCTAGATATGTCAAAGGCTGTAGAACGCCTGCTC
CTGGCTAGAGATCGTAAAGAACACGTCATGATTTATGGAGATAGCGATGTCGATGGCATGACAGGCGTCGCTCTCCTGGT
CGAATTTTTAAGAGATATTGATGTCCACGTTAGCTACTTCTTTCTTGGTGCGATACTCAAGCAACATGGAGAGACCTCCA
CACTCATTGCAAAGTTGAAAGAGGAAGGAATTACACTCCTCATCACCGTAGATTGCGGAATTACTGCAGGAAAAGAGGTG
AGTGATATTACAAGACAAGGCATTGATGTGATCATTACAGATCACCACATGCCGACAGGAAAAATTCCCCACTGCGTAGC
TACATTAAATCCTAAATTACGGGATCATACCTACCCGAATCGAGAACTCACAGGCGTAGGCGTTGCTTTTAAGCTCGCAA
GAGGAGTACTGAACGCACTGATATCCAGAAATCTTGTCCCCAAGAGTCAAGGTAGCCTGAAAAAATTACTCGATTTAGTC
ACATTAGGAACCATCACGGATGTCGGTGTTTTGCTAGGGGAAAACCGTGTTATGGTGCGCTATGGGATTAAAGAAATTGC
CAGAGGCGCGCGACCCGGATTGAATAAACTCTGCGCATTATGTGGAGTAGAAAAAAGCGAAGTCACTTCGACAGATATTG
TCTTGAAGATCGCACCAAAACTCAATAGCTTGGGACGGTTGGACGACCCTGCAAAAGGTGTTGAACTTTTACTCACCCAA
GATGATGAACGTGTAGATGCTCTAATTATGGAGCTAGATAATATAAATAGAGAAAGGCAAAGAATAGAAGCTGAGGTATT
TCAAGATGTCCAAGAGATATTAAATAGTAATCCTGAGATTTTAAAGCAGGCTGCTATAGTTCTTTCATCCACGGCATGGC
ATGCTCGTGTCATCCCTATTATCTCAGCGCGTCTTGCTAAGACTTATAACAAACCTGTGGTAATCATCGCTATCCAACGA
GGAATTGGAAAGGGATCAGCAAGAACTATAGGGTCATTTCCTCTACTCGGAGTCTTAAAGAAATGCTCCTCGCTCCTTTT
ATCTTACGGCGGACACGACTTTGCAGCAGGCGTGATTATGAAGGAAGATAAAGTCGAAGATTTTAAAAAAAAATTCGTTC
ATCTCGTGAACTCTTCTCTTAAAAAGGGTGACACACTTCCTCATCTCGAAATTGATGCTTATGCGGATTTTGATGCTATA
GATTATGATCTCCTAGCTTCTATGGAACTATTCGAGCCTTTTGGGAAGGGGAATCTGATGCCTATCTTCTATTCAAAAGT
GCGCCAGGTACGCTATCCAAAAGTATTGCCTGGAAACCATCTCAAACTCTACTTAAGCCAAAAAGAAAGAAATCTTGAGG
GTGTCGCCTTCGGTCTGGGAAGACACGCTGATGCATTAAAAGCAAGTTGGCATTACCCTCTTGAGATTGCTTACACACCC
CGCTTGTCCCAAACTTCTGGATCGGGAGTCATCCACCTGCTGGTCCGGGATTTCCGTATTTCCTCAGAACCTAGATTTTC
AGACTAA

Upstream 100 bases:

>100_bases
AATCGCTCAAAATAAGTACCGTTAAACTTAATCTAACGTGTAGCAATATAAAAATCTCCTTTGGGACTTTAGTCCCAAAG
GCCCCTGTGGTATTAAATTT

Downstream 100 bases:

>100_bases
AAAAAGACCGCTAACTTTCATTCGATTGGTTCTTTGTTCATTGCAAGTAAAAGATTTACTTCATTATCATAATAAATGAA
TGTTCTTTTCTAGATGAAGG

Product: ssDNA exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHLSSLYDPGLFLDMSKAVERLL
LARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYFFLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEV
SDITRQGIDVIITDHHMPTGKIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLV
TLGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPKLNSLGRLDDPAKGVELLLTQ
DDERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEILKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQR
GIGKGSARTIGSFPLLGVLKKCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAI
DYDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLGRHADALKASWHYPLEIAYTP
RLSQTSGSGVIHLLVRDFRISSEPRFSD

Sequences:

>Translated_588_residues
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHLSSLYDPGLFLDMSKAVERLL
LARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYFFLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEV
SDITRQGIDVIITDHHMPTGKIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLV
TLGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPKLNSLGRLDDPAKGVELLLTQ
DDERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEILKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQR
GIGKGSARTIGSFPLLGVLKKCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAI
DYDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLGRHADALKASWHYPLEIAYTP
RLSQTSGSGVIHLLVRDFRISSEPRFSD
>Mature_587_residues
TNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHLSSLYDPGLFLDMSKAVERLLL
ARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYFFLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEVS
DITRQGIDVIITDHHMPTGKIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLVT
LGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPKLNSLGRLDDPAKGVELLLTQD
DERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEILKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQRG
IGKGSARTIGSFPLLGVLKKCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAID
YDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLGRHADALKASWHYPLEIAYTPR
LSQTSGSGVIHLLVRDFRISSEPRFSD

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=443, Percent_Identity=31.1512415349887, Blast_Score=210, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65079; Mature: 64948

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHL
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLYDPGLFLDMSKAVERLLLARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYF
HHHCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEVSDITRQGIDVIITDHHMPTG
HHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCC
KIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLV
CCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TLGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPK
HHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCHHHHHHHHCCCHHHCCCCEEEEEECCC
LNSLGRLDDPAKGVELLLTQDDERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEI
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
LKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQRGIGKGSARTIGSFPLLGVLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
KCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAI
HHHHHHHHCCCCHHHHCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
DYDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECC
RHADALKASWHYPLEIAYTPRLSQTSGSGVIHLLVRDFRISSEPRFSD
CCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEEHHCCCCCCCCCC
>Mature Secondary Structure 
TNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHL
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLYDPGLFLDMSKAVERLLLARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYF
HHHCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEVSDITRQGIDVIITDHHMPTG
HHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCC
KIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLV
CCCEEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TLGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPK
HHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCHHHHHHHHCCCHHHCCCCEEEEEECCC
LNSLGRLDDPAKGVELLLTQDDERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEI
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
LKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQRGIGKGSARTIGSFPLLGVLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
KCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAI
HHHHHHHHCCCCHHHHCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
DYDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECC
RHADALKASWHYPLEIAYTPRLSQTSGSGVIHLLVRDFRISSEPRFSD
CCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]