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The map label for this gene is hemD

Identifier: 15836053

GI number: 15836053

Start: 603307

End: 603978

Strand: Direct

Name: hemD

Synonym: CPj0522

Alternate gene names: NA

Gene position: 603307-603978 (Clockwise)

Preceding gene: 161353804

Following gene: 15836054

Centisome position: 49.19

GC content: 42.26

Gene sequence:

>672_bases
ATGACCCTCTACTTAGGATTGAATCAAAAAACCGCTCGTAAATACCAAGCTCATTATTTGCCTATTCTAACTCTCTTCCC
CTATGCAAAAAGCACTCCACAAAATAAGCGTGCTCTTCAATTCCTTCCACAAGCAACCCATGTGATTCTCACAAGTCCCT
CATCCACTCACCTATTCCTTTCCAGAATGACTTCTCTTCTTTCTAAGGCCACTCTAAAAACAAAGACCTACCTCTGTATA
GGAGAGTCCACCAAAGAAAGACTTCTCTCTTTCCTTGGACAAGTGAAGTACGTAGTAGCAACTCAAGAAATCGCTGAAGG
CATCTTCCCATTGCTACAGGCACTGCCCTCTTCAGCCCGCATTCTCTACCCCCACTCCTCCCTCGCAAGACCTGTGATCA
GAGAATTTCTTTACAATCGATTTACTTTTTTCTCTTACCCTCACTACACAGTGAAGCCGCGAAAACTTAAAAAAAATATT
TTATCTAAATACAAAAAAATTATCTTCACAAGCCCTTCAACTGTAAGAGCTTTCGCCAAAATCTTTCCGCGATTTCCTGA
AAAAACCTACTGGTGCCAAGGAAGGATGACCTTGCAGGAGTTTCAAAAGTTCTCCTCTCAAAAGCAGGTATCTTTGTTAG
AAACGCTTGGGAAGTCCAGGACATCTCCGTGA

Upstream 100 bases:

>100_bases
CATGATCAAGAAGAACTAAGGGAAAAAGAAAAATTATTTTCAATATATCCCTTTGAAGGTACAAAAACTTAGGCAGCCTT
CCTTTTACCCGAAAAGACTC

Downstream 100 bases:

>100_bases
CAAAAAAGACCCCACTACTTTAAAATGCTTTATGCTCCGAAAAAAACTTAATTTTTAATAGTTTATGGCTTCTTCAGCTA
CTCCCGGTTTTGATGGAACG

Product: uroporphyrinogen-III synthase

Products: NA

Alternate protein names: Porphobilinogen Deaminase/Uroporphyrinogen-III Synthase

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTLYLGLNQKTARKYQAHYLPILTLFPYAKSTPQNKRALQFLPQATHVILTSPSSTHLFLSRMTSLLSKATLKTKTYLCI
GESTKERLLSFLGQVKYVVATQEIAEGIFPLLQALPSSARILYPHSSLARPVIREFLYNRFTFFSYPHYTVKPRKLKKNI
LSKYKKIIFTSPSTVRAFAKIFPRFPEKTYWCQGRMTLQEFQKFSSQKQVSLLETLGKSRTSP

Sequences:

>Translated_223_residues
MTLYLGLNQKTARKYQAHYLPILTLFPYAKSTPQNKRALQFLPQATHVILTSPSSTHLFLSRMTSLLSKATLKTKTYLCI
GESTKERLLSFLGQVKYVVATQEIAEGIFPLLQALPSSARILYPHSSLARPVIREFLYNRFTFFSYPHYTVKPRKLKKNI
LSKYKKIIFTSPSTVRAFAKIFPRFPEKTYWCQGRMTLQEFQKFSSQKQVSLLETLGKSRTSP
>Mature_222_residues
TLYLGLNQKTARKYQAHYLPILTLFPYAKSTPQNKRALQFLPQATHVILTSPSSTHLFLSRMTSLLSKATLKTKTYLCIG
ESTKERLLSFLGQVKYVVATQEIAEGIFPLLQALPSSARILYPHSSLARPVIREFLYNRFTFFSYPHYTVKPRKLKKNIL
SKYKKIIFTSPSTVRAFAKIFPRFPEKTYWCQGRMTLQEFQKFSSQKQVSLLETLGKSRTSP

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25728; Mature: 25596

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYLGLNQKTARKYQAHYLPILTLFPYAKSTPQNKRALQFLPQATHVILTSPSSTHLFL
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHH
SRMTSLLSKATLKTKTYLCIGESTKERLLSFLGQVKYVVATQEIAEGIFPLLQALPSSAR
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ILYPHSSLARPVIREFLYNRFTFFSYPHYTVKPRKLKKNILSKYKKIIFTSPSTVRAFAK
EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHH
IFPRFPEKTYWCQGRMTLQEFQKFSSQKQVSLLETLGKSRTSP
HHCCCCCCCEEECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLYLGLNQKTARKYQAHYLPILTLFPYAKSTPQNKRALQFLPQATHVILTSPSSTHLFL
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHH
SRMTSLLSKATLKTKTYLCIGESTKERLLSFLGQVKYVVATQEIAEGIFPLLQALPSSAR
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ILYPHSSLARPVIREFLYNRFTFFSYPHYTVKPRKLKKNILSKYKKIIFTSPSTVRAFAK
EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHH
IFPRFPEKTYWCQGRMTLQEFQKFSSQKQVSLLETLGKSRTSP
HHCCCCCCCEEECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA