| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836021
GI number: 15836021
Start: 570598
End: 572655
Strand: Direct
Name: Not Available
Synonym: CPj0490
Alternate gene names: NA
Gene position: 570598-572655 (Clockwise)
Preceding gene: 15836016
Following gene: 15836023
Centisome position: 46.52
GC content: 43.88
Gene sequence:
>2058_bases ATGTATAACCTACTCCACGCGCATCATGATGCAGCCTCCCCAGACGGACGACTCGTTTCCCATTTGAAAAAACTCTCGCC CCACATTTACGAAGGAGAGGTCCTCATTGAGAATATTCCTGCGTACTTTCTTGGATTTCATCTGCCTCAACAGTGTATAC AAGTAAATTTAAAAAGTTCCTTAGCCCAACTAGGTGTCGAAGCCGTTTTAAACCACTTGGAGCTAAATAAAGCCCGAAAA GAAGCTCGTCTACACGTTCTCTTCATGAGCCAAGATCCTATAGCCACTGCTATGTTGGAGCTCCTAGAGCCTGGAAGTTT TGTCTGCAAGCTCTTTGCTGCTGATGATCGCCGACTCGTACGTTCGCCTTGTTATCTCAACAGGATGTTTACGCACACAG ACCGTACAGGATCTCCGCTCCTACGCTTTGGGAAAAAACTTGAGCACTTCATCACTCTAGAGATCATTAATGATCGGCTT GTTGTCTTCCTTCCGATCCTTCCAGGAACAATCTGTTACGAAGAGACAATTTATGGGTTCCTTCCCTTAATGAGCAAATC ACTCACGCGTCCCCATTTAAAAATACGTAAGTTTCTTCCTTTGTATCAAATGGTAACAGATCGTCCTCCCGTTCCCGAAG ATCATAAAATTCTTCTCATAAAGACAGAGCCTCTGCACATCCGAACCGTATTTGCAAGAGTCGTTCAGGACTTACTCCCC CAAGGGCTTCGTCACACCGCAGCGGATATTCTCGAACCTACCACACAAGAATCTGGAGATATTTATGAATTCTACGGCAG CACTTCAGAACCTATTGAGAGAATACCTTTAGAATTTTTTACTCTTGAGCCTTACAAAGAGCATTCGTTTTTCTTCTATA GAGATATGCTCCAGGAAACCTTAGAATCTCCTCAAGAGGTATTTCGTGTTTTTGAATCCATACCGGAAGGCGAAGATCAA GCTGCGATGTTTATCTCCAAAGGTAGTGAGCTGCTTGAGCTCTCCCAAGACTCTTGGATCATCAAACCTCGAATCTCCCC ATCAGATGAAAGACATGCTAGGGAAATTCAAAAGCACATTGAAGACCAACCTTGTTTCCCTTTTTTAAAAGCCATGGAAA CAGATCATATCACAAGCCAAGGAGTTTTATTTTCCCGCTACTTCCCTTCAGCATCGCTGAAGGGCATGTTCCTCTCTAAC TACTCTCGCTATTACCTGCAACATATCTATTTTCAGATTCCCTCTCCCACTTCTGGAGAGTTTTTCTCGAATCGAGATCG CTCTTTCCTTCTCGATCTATATTTTGCAGGAATTTCTGTATTTTGGGCAGACTTAGAATCGAAACGACTCTTACAATACA TCAAACGCAGAAATAAAGATGTGGGCATGTTTGTCCCTAAACATCAAGCTGAACAGTTTGCTCAATCCTACTTTATAGGA ATTCATGGTTCCTGCCTAATCGCTGGGGATTATGATGAGTTTCTCCGTGAGCTCCTGACAGGAATGCATACTCTTTCTCA GCAATTCACGATCCCAGAATTTCCACCACAGACACCGTTAGCAATCCTTACAGGAGGGGGTTCTGGAGCTATGGAACTCG CGAATCGTGTAGCTACAGAACTCTCCATACTCTCTTGTGGGAATCTAATTAGCTTGGATACCACGAATGCCTATGTAGAA GCTAAAATGAGCTATGCTATTCCTGATCTTTTAGAACGTCAGGCCGACTTCCATGTCGACCTTGCTGTATTTGTTATCGG AGGCATGGGAACCGATTTCGAACTCCTTCTGGAGCTTATTAGTCTCAAAACAGGGAAAAAAGCTCTTGTTCCCGTCTTCC TAATCGGACCTGTAGACTATTGGAAATCCAAGATCACAGCTTTGTATAATTCCAATCATGCTGTAGGAACCATTCGAGGT TCTGAATGGGTACACAACTGCCTATTCTGCCTATCCTCAGCAAAGGCAGGCATTGCAATCTTCCGCAGATATCTCAATCA TACGCTGCCCATAGGACCTGAACACCCTGTCCCTGAAGATGGTTTTGTTATCGTTTAG
Upstream 100 bases:
>100_bases CAGAATGAAGTCCTTGTAGGAAATTCTTCTGGAAACGCTAGTCTTAGAAGCGCAAAGAGGGACCTTACCTATTGCTTTTA ACTTTAAAATACGATGAATT
Downstream 100 bases:
>100_bases AATCCATAGGTAAGACGGAAACCGTAGTAATTACACGGTTCACGAATGAATTGGCCTTCTTTAGAAAATCCCTGATGATA TTCTAAAACAGCACGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 685; Mature: 685
Protein sequence:
>685_residues MYNLLHAHHDAASPDGRLVSHLKKLSPHIYEGEVLIENIPAYFLGFHLPQQCIQVNLKSSLAQLGVEAVLNHLELNKARK EARLHVLFMSQDPIATAMLELLEPGSFVCKLFAADDRRLVRSPCYLNRMFTHTDRTGSPLLRFGKKLEHFITLEIINDRL VVFLPILPGTICYEETIYGFLPLMSKSLTRPHLKIRKFLPLYQMVTDRPPVPEDHKILLIKTEPLHIRTVFARVVQDLLP QGLRHTAADILEPTTQESGDIYEFYGSTSEPIERIPLEFFTLEPYKEHSFFFYRDMLQETLESPQEVFRVFESIPEGEDQ AAMFISKGSELLELSQDSWIIKPRISPSDERHAREIQKHIEDQPCFPFLKAMETDHITSQGVLFSRYFPSASLKGMFLSN YSRYYLQHIYFQIPSPTSGEFFSNRDRSFLLDLYFAGISVFWADLESKRLLQYIKRRNKDVGMFVPKHQAEQFAQSYFIG IHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEFPPQTPLAILTGGGSGAMELANRVATELSILSCGNLISLDTTNAYVE AKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELISLKTGKKALVPVFLIGPVDYWKSKITALYNSNHAVGTIRG SEWVHNCLFCLSSAKAGIAIFRRYLNHTLPIGPEHPVPEDGFVIV
Sequences:
>Translated_685_residues MYNLLHAHHDAASPDGRLVSHLKKLSPHIYEGEVLIENIPAYFLGFHLPQQCIQVNLKSSLAQLGVEAVLNHLELNKARK EARLHVLFMSQDPIATAMLELLEPGSFVCKLFAADDRRLVRSPCYLNRMFTHTDRTGSPLLRFGKKLEHFITLEIINDRL VVFLPILPGTICYEETIYGFLPLMSKSLTRPHLKIRKFLPLYQMVTDRPPVPEDHKILLIKTEPLHIRTVFARVVQDLLP QGLRHTAADILEPTTQESGDIYEFYGSTSEPIERIPLEFFTLEPYKEHSFFFYRDMLQETLESPQEVFRVFESIPEGEDQ AAMFISKGSELLELSQDSWIIKPRISPSDERHAREIQKHIEDQPCFPFLKAMETDHITSQGVLFSRYFPSASLKGMFLSN YSRYYLQHIYFQIPSPTSGEFFSNRDRSFLLDLYFAGISVFWADLESKRLLQYIKRRNKDVGMFVPKHQAEQFAQSYFIG IHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEFPPQTPLAILTGGGSGAMELANRVATELSILSCGNLISLDTTNAYVE AKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELISLKTGKKALVPVFLIGPVDYWKSKITALYNSNHAVGTIRG SEWVHNCLFCLSSAKAGIAIFRRYLNHTLPIGPEHPVPEDGFVIV >Mature_685_residues MYNLLHAHHDAASPDGRLVSHLKKLSPHIYEGEVLIENIPAYFLGFHLPQQCIQVNLKSSLAQLGVEAVLNHLELNKARK EARLHVLFMSQDPIATAMLELLEPGSFVCKLFAADDRRLVRSPCYLNRMFTHTDRTGSPLLRFGKKLEHFITLEIINDRL VVFLPILPGTICYEETIYGFLPLMSKSLTRPHLKIRKFLPLYQMVTDRPPVPEDHKILLIKTEPLHIRTVFARVVQDLLP QGLRHTAADILEPTTQESGDIYEFYGSTSEPIERIPLEFFTLEPYKEHSFFFYRDMLQETLESPQEVFRVFESIPEGEDQ AAMFISKGSELLELSQDSWIIKPRISPSDERHAREIQKHIEDQPCFPFLKAMETDHITSQGVLFSRYFPSASLKGMFLSN YSRYYLQHIYFQIPSPTSGEFFSNRDRSFLLDLYFAGISVFWADLESKRLLQYIKRRNKDVGMFVPKHQAEQFAQSYFIG IHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEFPPQTPLAILTGGGSGAMELANRVATELSILSCGNLISLDTTNAYVE AKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELISLKTGKKALVPVFLIGPVDYWKSKITALYNSNHAVGTIRG SEWVHNCLFCLSSAKAGIAIFRRYLNHTLPIGPEHPVPEDGFVIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77980; Mature: 77980
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLLHAHHDAASPDGRLVSHLKKLSPHIYEGEVLIENIPAYFLGFHLPQQCIQVNLKSS CCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCEEEECCCHHHHHHHCCHHHHHHHHHHH LAQLGVEAVLNHLELNKARKEARLHVLFMSQDPIATAMLELLEPGSFVCKLFAADDRRLV HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHH RSPCYLNRMFTHTDRTGSPLLRFGKKLEHFITLEIINDRLVVFLPILPGTICYEETIYGF HCCHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHH LPLMSKSLTRPHLKIRKFLPLYQMVTDRPPVPEDHKILLIKTEPLHIRTVFARVVQDLLP HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH QGLRHTAADILEPTTQESGDIYEFYGSTSEPIERIPLEFFTLEPYKEHSFFFYRDMLQET HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHH LESPQEVFRVFESIPEGEDQAAMFISKGSELLELSQDSWIIKPRISPSDERHAREIQKHI HHCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC EDQPCFPFLKAMETDHITSQGVLFSRYFPSASLKGMFLSNYSRYYLQHIYFQIPSPTSGE CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCC FFSNRDRSFLLDLYFAGISVFWADLESKRLLQYIKRRNKDVGMFVPKHQAEQFAQSYFIG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHEEE IHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEFPPQTPLAILTGGGSGAMELANRVATE ECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH LSILSCGNLISLDTTNAYVEAKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELI HHHEECCCEEEECCCCCEEEEHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHH SLKTGKKALVPVFLIGPVDYWKSKITALYNSNHAVGTIRGSEWVHNCLFCLSSAKAGIAI HCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHH FRRYLNHTLPIGPEHPVPEDGFVIV HHHHHHCCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MYNLLHAHHDAASPDGRLVSHLKKLSPHIYEGEVLIENIPAYFLGFHLPQQCIQVNLKSS CCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCEEEECCCHHHHHHHCCHHHHHHHHHHH LAQLGVEAVLNHLELNKARKEARLHVLFMSQDPIATAMLELLEPGSFVCKLFAADDRRLV HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHH RSPCYLNRMFTHTDRTGSPLLRFGKKLEHFITLEIINDRLVVFLPILPGTICYEETIYGF HCCHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHH LPLMSKSLTRPHLKIRKFLPLYQMVTDRPPVPEDHKILLIKTEPLHIRTVFARVVQDLLP HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH QGLRHTAADILEPTTQESGDIYEFYGSTSEPIERIPLEFFTLEPYKEHSFFFYRDMLQET HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHH LESPQEVFRVFESIPEGEDQAAMFISKGSELLELSQDSWIIKPRISPSDERHAREIQKHI HHCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC EDQPCFPFLKAMETDHITSQGVLFSRYFPSASLKGMFLSNYSRYYLQHIYFQIPSPTSGE CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCC FFSNRDRSFLLDLYFAGISVFWADLESKRLLQYIKRRNKDVGMFVPKHQAEQFAQSYFIG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHEEE IHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEFPPQTPLAILTGGGSGAMELANRVATE ECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH LSILSCGNLISLDTTNAYVEAKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELI HHHEECCCEEEECCCCCEEEEHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHH SLKTGKKALVPVFLIGPVDYWKSKITALYNSNHAVGTIRGSEWVHNCLFCLSSAKAGIAI HCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHH FRRYLNHTLPIGPEHPVPEDGFVIV HHHHHHCCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA