| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836012
GI number: 15836012
Start: 558655
End: 560265
Strand: Reverse
Name: Not Available
Synonym: CPj0481
Alternate gene names: NA
Gene position: 560265-558655 (Counterclockwise)
Preceding gene: 15836013
Following gene: 15836011
Centisome position: 45.68
GC content: 42.02
Gene sequence:
>1611_bases ATGGCAACCTCTGTTCCTGTAACTTCATCTACTTCTGTAGGAGAGGCTAACTCCTCCAACGAAAGATTTACTGAACGAAC ATCGCGAATGTATTACGCAGCTTTAGTCCTAGGGGCTTTGAGCTGTTTAATTTTTATTGCTATGATTGTCATTTTCCCAC AGGTCGGATTGTGGGCTGTGGTCCTCGGGTTTGCTCTTGGATGTTTACTTTTAAGCTTAGCTATCGTTTTTGCTGTCTCC GGTCTCGTTTTAGGCAAGACTTTAGAACCTAGTCGAGAAGCGACTCCTCCAGAAATTGTTGCGCAAAAGGAGTGGACTAC ACAACAAGATGTCTTAGGGAATGAGTATTGGCGTTCCGAGTTGATTTCCTTGTTCTTACGAGGGGATCTCCACGAATCTC TGATTGTTGATTCTAAGGATCGATCTTTAGATATTGATCAGAGTTTACAAAATATATTGAAACTTGAGCCCCTATCTACG ACACTTTCGCTGTTAAAGAAAGATTGTGTCCACATCAATATCATTTTACATTTAGTGAGACAGTGGAACTTACTGGGAGT GGATCTTAGTCCTGAAGTCACTGCGCACGCCGAGGAACTTCTACTCTTTTTGATAGAAGAGCAGTATTACTCTCCTGATA TTTTGAAATTGATTCGCTACGGAGATGCTTTACAAGCAACGTCTCCTTTGATGGATTGGGCAGATTCAGGTTCCTTTAGT GTAGACGCAGACGGGGTATTTAGCTGTCGCAGAGAAGAATGTTCTCCTGAGGATGCTTTGGCGCAATTCGATCTTCTTTT GGCGTTGGAAAATCCCGACAGACGCTTCTTAAAGGATTCTTTTCTTACCTACATTTGGTCGTCTTCATTTTTTGAGAAGT TTTTACATCGCCATCTAGAGAGCTTGCAAAGAAAGCTCCCAGAGACAGCGATCGATGTCGCCCGCTATGAAGCACAAATA CAAACATTTCTCTCTCGCTATTTTCAGAAGCTCGATTTGATAAACGCAATGTCCTTAGATTGGGGATATAACTGTGCTGA GGGAGAAAAATGTTATGAGAGCGCAAATCAAAGATTAGACAACCTATTTATTGCTTTTTCTTCTTCTGTTCCTGCTATGA AGCGGCTCTTTGACAAATATGGTTCTGTGGTACGGGTAGATCGTAGGCAGATTCGTGAGCAGATTCTTTCGAACACTGAA ATCTTAGAAAATGAGTCAGGGTTCCTCTGCAGTTTGTATGAATATCCTTTATCCTATTTGATAGATTGGGCTGTTTTGCT AGACTGTGTTCGCGGTACCGAAATCTCTCTAGAAGATCAGGCCGATTACACCGTTTGTTTGCAAGGCTTGGATTCTATGT TATCTCAATTTGCGAGTCGTTTACAGTCTGGACAAAAAGTATTGAATCCTAGAGATGTTTTAAGTGAACAGGCTGCGGTT ATGCTTGTTCATGGCTTGGCAGCACAGGGCGTGTCGTTTCAAGGATTGAAAGCTTTGATGTATTTGACAGCCGTTCCCCA AAGAATGTGGTTAGGAGCATTGCCTTTATTTGAATCTTTTCCTGTCTTTAATCGGATGAAAGAATTTCTTGGGGAATCTC TGGGAGACTAG
Upstream 100 bases:
>100_bases TTCAACAAGCGATTACAGATTTAAAGAGCGAAGGGGTGATTCAATCTTTAACCAAGAAATGGCAACTTTCTGAAGTTGCT TACGAATAGAGGGTATTCTT
Downstream 100 bases:
>100_bases GTGAATTTGTATCAAAGAAGGAACAAGATTGCATGTTAGGTTCTTTGCCATGTTATCCTGGTGCTGGCAATATTGAAGAA TACAAAAATAGGTATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVS GLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLST TLSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQI QTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTE ILENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD
Sequences:
>Translated_536_residues MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVS GLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLST TLSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQI QTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTE ILENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD >Mature_535_residues ATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVSG LVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTT LSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFSV DADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQIQ TFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEI LENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAVM LVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60417; Mature: 60286
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VLGFALGCLLLSLAIVFAVSGLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHCHHHHHHH LISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTTLSLLKKDCVHINIILHLVR HHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS HCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCC VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLE CCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQRKLPETAIDVARYEAQIQTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEILENESGFLCSLYEYPLSYL HHHEEECCCCHHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHH IDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VLGFALGCLLLSLAIVFAVSGLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHCHHHHHHH LISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTTLSLLKKDCVHINIILHLVR HHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS HCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCC VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLE CCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQRKLPETAIDVARYEAQIQTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEILENESGFLCSLYEYPLSYL HHHEEECCCCHHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHH IDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA