Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836012

GI number: 15836012

Start: 558655

End: 560265

Strand: Reverse

Name: Not Available

Synonym: CPj0481

Alternate gene names: NA

Gene position: 560265-558655 (Counterclockwise)

Preceding gene: 15836013

Following gene: 15836011

Centisome position: 45.68

GC content: 42.02

Gene sequence:

>1611_bases
ATGGCAACCTCTGTTCCTGTAACTTCATCTACTTCTGTAGGAGAGGCTAACTCCTCCAACGAAAGATTTACTGAACGAAC
ATCGCGAATGTATTACGCAGCTTTAGTCCTAGGGGCTTTGAGCTGTTTAATTTTTATTGCTATGATTGTCATTTTCCCAC
AGGTCGGATTGTGGGCTGTGGTCCTCGGGTTTGCTCTTGGATGTTTACTTTTAAGCTTAGCTATCGTTTTTGCTGTCTCC
GGTCTCGTTTTAGGCAAGACTTTAGAACCTAGTCGAGAAGCGACTCCTCCAGAAATTGTTGCGCAAAAGGAGTGGACTAC
ACAACAAGATGTCTTAGGGAATGAGTATTGGCGTTCCGAGTTGATTTCCTTGTTCTTACGAGGGGATCTCCACGAATCTC
TGATTGTTGATTCTAAGGATCGATCTTTAGATATTGATCAGAGTTTACAAAATATATTGAAACTTGAGCCCCTATCTACG
ACACTTTCGCTGTTAAAGAAAGATTGTGTCCACATCAATATCATTTTACATTTAGTGAGACAGTGGAACTTACTGGGAGT
GGATCTTAGTCCTGAAGTCACTGCGCACGCCGAGGAACTTCTACTCTTTTTGATAGAAGAGCAGTATTACTCTCCTGATA
TTTTGAAATTGATTCGCTACGGAGATGCTTTACAAGCAACGTCTCCTTTGATGGATTGGGCAGATTCAGGTTCCTTTAGT
GTAGACGCAGACGGGGTATTTAGCTGTCGCAGAGAAGAATGTTCTCCTGAGGATGCTTTGGCGCAATTCGATCTTCTTTT
GGCGTTGGAAAATCCCGACAGACGCTTCTTAAAGGATTCTTTTCTTACCTACATTTGGTCGTCTTCATTTTTTGAGAAGT
TTTTACATCGCCATCTAGAGAGCTTGCAAAGAAAGCTCCCAGAGACAGCGATCGATGTCGCCCGCTATGAAGCACAAATA
CAAACATTTCTCTCTCGCTATTTTCAGAAGCTCGATTTGATAAACGCAATGTCCTTAGATTGGGGATATAACTGTGCTGA
GGGAGAAAAATGTTATGAGAGCGCAAATCAAAGATTAGACAACCTATTTATTGCTTTTTCTTCTTCTGTTCCTGCTATGA
AGCGGCTCTTTGACAAATATGGTTCTGTGGTACGGGTAGATCGTAGGCAGATTCGTGAGCAGATTCTTTCGAACACTGAA
ATCTTAGAAAATGAGTCAGGGTTCCTCTGCAGTTTGTATGAATATCCTTTATCCTATTTGATAGATTGGGCTGTTTTGCT
AGACTGTGTTCGCGGTACCGAAATCTCTCTAGAAGATCAGGCCGATTACACCGTTTGTTTGCAAGGCTTGGATTCTATGT
TATCTCAATTTGCGAGTCGTTTACAGTCTGGACAAAAAGTATTGAATCCTAGAGATGTTTTAAGTGAACAGGCTGCGGTT
ATGCTTGTTCATGGCTTGGCAGCACAGGGCGTGTCGTTTCAAGGATTGAAAGCTTTGATGTATTTGACAGCCGTTCCCCA
AAGAATGTGGTTAGGAGCATTGCCTTTATTTGAATCTTTTCCTGTCTTTAATCGGATGAAAGAATTTCTTGGGGAATCTC
TGGGAGACTAG

Upstream 100 bases:

>100_bases
TTCAACAAGCGATTACAGATTTAAAGAGCGAAGGGGTGATTCAATCTTTAACCAAGAAATGGCAACTTTCTGAAGTTGCT
TACGAATAGAGGGTATTCTT

Downstream 100 bases:

>100_bases
GTGAATTTGTATCAAAGAAGGAACAAGATTGCATGTTAGGTTCTTTGCCATGTTATCCTGGTGCTGGCAATATTGAAGAA
TACAAAAATAGGTATTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVS
GLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLST
TLSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS
VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQI
QTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTE
ILENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV
MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD

Sequences:

>Translated_536_residues
MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVS
GLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLST
TLSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS
VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQI
QTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTE
ILENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV
MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD
>Mature_535_residues
ATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAVVLGFALGCLLLSLAIVFAVSG
LVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSELISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTT
LSLLKKDCVHINIILHLVRQWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFSV
DADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLESLQRKLPETAIDVARYEAQIQ
TFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLDNLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEI
LENESGFLCSLYEYPLSYLIDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAVM
LVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60417; Mature: 60286

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLGFALGCLLLSLAIVFAVSGLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHCHHHHHHH
LISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTTLSLLKKDCVHINIILHLVR
HHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS
HCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCC
VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLE
CCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQRKLPETAIDVARYEAQIQTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEILENESGFLCSLYEYPLSYL
HHHEEECCCCHHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHH
IDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH
MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATSVPVTSSTSVGEANSSNERFTERTSRMYYAALVLGALSCLIFIAMIVIFPQVGLWAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLGFALGCLLLSLAIVFAVSGLVLGKTLEPSREATPPEIVAQKEWTTQQDVLGNEYWRSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHCHHHHHHH
LISLFLRGDLHESLIVDSKDRSLDIDQSLQNILKLEPLSTTLSLLKKDCVHINIILHLVR
HHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QWNLLGVDLSPEVTAHAEELLLFLIEEQYYSPDILKLIRYGDALQATSPLMDWADSGSFS
HCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCCCC
VDADGVFSCRREECSPEDALAQFDLLLALENPDRRFLKDSFLTYIWSSSFFEKFLHRHLE
CCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQRKLPETAIDVARYEAQIQTFLSRYFQKLDLINAMSLDWGYNCAEGEKCYESANQRLD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NLFIAFSSSVPAMKRLFDKYGSVVRVDRRQIREQILSNTEILENESGFLCSLYEYPLSYL
HHHEEECCCCHHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHH
IDWAVLLDCVRGTEISLEDQADYTVCLQGLDSMLSQFASRLQSGQKVLNPRDVLSEQAAV
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH
MLVHGLAAQGVSFQGLKALMYLTAVPQRMWLGALPLFESFPVFNRMKEFLGESLGD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA