Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835995

GI number: 15835995

Start: 531682

End: 532161

Strand: Reverse

Name: Not Available

Synonym: CPj0464

Alternate gene names: NA

Gene position: 532161-531682 (Counterclockwise)

Preceding gene: 15835996

Following gene: 15835994

Centisome position: 43.39

GC content: 43.12

Gene sequence:

>480_bases
TTGTTCTCTGAGGGGACAGCTCTAAATTTATTTCGTATATTTGCTCCACTACGCAACCGTGTGACTACAGAATACAGTCG
TGCTAGGCAACCCGACCTACATAGAATTGCCATCGTCTATATAGGAGTTCTCGATTCAGAAAGTTCCAAGATCCTAGAGC
GGCTAATCTCTTATATGAGTTGTATCTATTCTGAATCGCAAATGTATTTAAGATTCTTTATGGGCAAGAATGTAAATCAA
AGTGCTGTACTCTCAAAATTACATGTAGAAAATCTGCACATCCGTTGTGGGTTTTTCAGCGAGGATGCTGTTCCAGAGAG
TGAGCCCTTCGATCTCTCCATCTACGTGCACACAGATCGTAGCTGTCCTCTCCCTACGAAAAAACGGAGCAGCTCCTGGG
AACTCCAAACTGTAGAACTCCCAGAGTCAATATATCCACAGTCGGAATTCCTATTGATGAGACCTCGAATGCTTTCGTAG

Upstream 100 bases:

>100_bases
AGACAAAGGCTCTCATTAGAGCCTAGAGACGAGGGGAAGGTTCGCGGAGATCTGCCTTCAGCTCCTTTTTTTTGATATCC
AAAGTCTCAAGTTCCTACAG

Downstream 100 bases:

>100_bases
ACTCTATGATGAAACAAGGAGTCGGGCAGGATGCTAAAGAGCTATACACATTTCTATCTCGTGGGAATGAGCATTACCAA
CCGTGTCTATGGTTCAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFSEGTALNLFRIFAPLRNRVTTEYSRARQPDLHRIAIVYIGVLDSESSKILERLISYMSCIYSESQMYLRFFMGKNVNQ
SAVLSKLHVENLHIRCGFFSEDAVPESEPFDLSIYVHTDRSCPLPTKKRSSSWELQTVELPESIYPQSEFLLMRPRMLS

Sequences:

>Translated_159_residues
MFSEGTALNLFRIFAPLRNRVTTEYSRARQPDLHRIAIVYIGVLDSESSKILERLISYMSCIYSESQMYLRFFMGKNVNQ
SAVLSKLHVENLHIRCGFFSEDAVPESEPFDLSIYVHTDRSCPLPTKKRSSSWELQTVELPESIYPQSEFLLMRPRMLS
>Mature_159_residues
MFSEGTALNLFRIFAPLRNRVTTEYSRARQPDLHRIAIVYIGVLDSESSKILERLISYMSCIYSESQMYLRFFMGKNVNQ
SAVLSKLHVENLHIRCGFFSEDAVPESEPFDLSIYVHTDRSCPLPTKKRSSSWELQTVELPESIYPQSEFLLMRPRMLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18478; Mature: 18478

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSEGTALNLFRIFAPLRNRVTTEYSRARQPDLHRIAIVYIGVLDSESSKILERLISYMS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
CIYSESQMYLRFFMGKNVNQSAVLSKLHVENLHIRCGFFSEDAVPESEPFDLSIYVHTDR
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEEEEECCC
SCPLPTKKRSSSWELQTVELPESIYPQSEFLLMRPRMLS
CCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MFSEGTALNLFRIFAPLRNRVTTEYSRARQPDLHRIAIVYIGVLDSESSKILERLISYMS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
CIYSESQMYLRFFMGKNVNQSAVLSKLHVENLHIRCGFFSEDAVPESEPFDLSIYVHTDR
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEEEEECCC
SCPLPTKKRSSSWELQTVELPESIYPQSEFLLMRPRMLS
CCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA