| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835941
GI number: 15835941
Start: 453814
End: 454293
Strand: Direct
Name: Not Available
Synonym: CPj0408
Alternate gene names: NA
Gene position: 453814-454293 (Clockwise)
Preceding gene: 15835939
Following gene: 15835942
Centisome position: 37.0
GC content: 35.83
Gene sequence:
>480_bases ATGTTTTTTAATCTTTTTTCTTTAGTTTTTAAGCTTTCTGATGAGCTTGCTCTTGCAGAAACGATCCAAGAGCCCATTTC TGTACATGAAATGTTCCCAGGAAGCATGAAATTAGAAATGTTTAAAATGCTAGGATCTTTGATTCTACTTTTAACAATTT TTGGCTTTGGAGTTTGGGCGTTTAAAAAGTTTGTGAGATCAAGAAGTCACGGTTTTGGAGGCTCGTCTCAAATCAAAATC CTAGAACGACGTTCCCTAACGCCGAAAACTTCTATTTACCTCATTCGAGTTGTGAATAAAACTCTTGTGATTGCAGAAAC ACCAGAAAAAATTACGCTACTGACAGAGTTTCCTCCCGACACTGATATCAATCATCTACTTCAAGAAAATAATAAGCAGT CTTCTTCCTCTGCAACCTCTGATTTCCTCAGTAAAGCAATACAAAAGATACAAAAAAAACAACAGACGAATCAAGATTAG
Upstream 100 bases:
>100_bases ATAGCATCGACTAAAACTATACTTCATTATTACTTGTATGTAGTTGGATACAAATCGGGCTACCACTATAATTTTATAGA GATGATCGCGGGTCTTACAC
Downstream 100 bases:
>100_bases ATCTAGTATTATCAGCCAGCAATGATGCAGGCTCTAGGAACAACTTGGAGTATTTCCTAAATGACGACATGGACATTAAA TCAAAATAATCTCACAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILLLTIFGFGVWAFKKFVRSRSHGFGGSSQIKI LERRSLTPKTSIYLIRVVNKTLVIAETPEKITLLTEFPPDTDINHLLQENNKQSSSSATSDFLSKAIQKIQKKQQTNQD
Sequences:
>Translated_159_residues MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILLLTIFGFGVWAFKKFVRSRSHGFGGSSQIKI LERRSLTPKTSIYLIRVVNKTLVIAETPEKITLLTEFPPDTDINHLLQENNKQSSSSATSDFLSKAIQKIQKKQQTNQD >Mature_159_residues MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILLLTIFGFGVWAFKKFVRSRSHGFGGSSQIKI LERRSLTPKTSIYLIRVVNKTLVIAETPEKITLLTEFPPDTDINHLLQENNKQSSSSATSDFLSKAIQKIQKKQQTNQD
Specific function: Unknown
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18057; Mature: 18057
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILLLTIFGFGVWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKKFVRSRSHGFGGSSQIKILERRSLTPKTSIYLIRVVNKTLVIAETPEKITLLTEFPPD HHHHHHHHCCCCCCCCCEEEHHHCCCCCCHHEEHEEEECCEEEEEECCCEEEEEECCCCC TDINHLLQENNKQSSSSATSDFLSKAIQKIQKKQQTNQD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFFNLFSLVFKLSDELALAETIQEPISVHEMFPGSMKLEMFKMLGSLILLLTIFGFGVWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKKFVRSRSHGFGGSSQIKILERRSLTPKTSIYLIRVVNKTLVIAETPEKITLLTEFPPD HHHHHHHHCCCCCCCCCEEEHHHCCCCCCHHEEHEEEECCEEEEEECCCEEEEEECCCCC TDINHLLQENNKQSSSSATSDFLSKAIQKIQKKQQTNQD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA