| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835900
GI number: 15835900
Start: 412811
End: 413548
Strand: Direct
Name: Not Available
Synonym: CPj0367
Alternate gene names: NA
Gene position: 412811-413548 (Clockwise)
Preceding gene: 15835899
Following gene: 15835901
Centisome position: 33.66
GC content: 45.12
Gene sequence:
>738_bases ATGACTAAAACCACTTCAATCCCAGATGTACACGAGAATCAATCACATTTGTCTGTAGATGAGAGATTGATCTCAGAATC ACCCGTGCTTACTAAGAAAGAAGTGATTGCTAAAATAATAAAACTCACAGCTCTTATTCTTGCTTTAGCCATAGCTGTAG GGACTGCAGTTGTTGCTGGAGTTCTTGGTATGCCTCTCATGGCTATAGCCACTGGTGCTGCTCTCCTTGCAGCAGTCGTA CTCTCTTGTCTTCTTTTAAGAAGAAGAGAGCCATCCAAACCGACAGAAGAGCTCCTTGGGCCCCAAAAACATGTCCCCAA GGATATTGCAGCTCAAGTGCAACCCTCAGTCCCTCTGGATTACCAAAAGCTGCTGAGAAATGAATGGACCCTAGTCAATA CTCTCTCAGAAATCAATATATCCTGGACTCTCCAAGATCCTAATCAAAGATACTATGTCTGGGAACATCAAGGAGCCCCA ATTACCTTAGTAGCCACTACAGGAGACATCGCTAAACCACGCCTGAAAACCTCAGGAAGAGTCATGATTGTTAACGCAGC GAATTCGAACATGCAATCTGGTGGAGCCGGAACCAATGCTGCTCTCTCAGCAGCCACACACCCTACTTGTTGGAACAATA CGAGAACATCTGGGGGAAAAATAAACACTGGCAAAGGATTATCTGTGGGTGAATGCCGCTCAGCACCCTGGATCAATAGA GACTGGACGAATAAATGA
Upstream 100 bases:
>100_bases AATTAAAAAGAATTTATAAAAATCTTTATTATCAAAGAAAAAGATTTTTTGTAAAAAACAACAAATTAAGATATAATCTT TTCCTTTAAATAGATATTTT
Downstream 100 bases:
>100_bases TACGAACCCAGGAGAAGCACATTTCTTAGCACAACTTCTTGGTCCTAAATATGAAGGAGAATTGAAAGCACATCCTGAGA AATTAAGCAATGTTATTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTKTTSIPDVHENQSHLSVDERLISESPVLTKKEVIAKIIKLTALILALAIAVGTAVVAGVLGMPLMAIATGAALLAAVV LSCLLLRRREPSKPTEELLGPQKHVPKDIAAQVQPSVPLDYQKLLRNEWTLVNTLSEINISWTLQDPNQRYYVWEHQGAP ITLVATTGDIAKPRLKTSGRVMIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRTSGGKINTGKGLSVGECRSAPWINR DWTNK
Sequences:
>Translated_245_residues MTKTTSIPDVHENQSHLSVDERLISESPVLTKKEVIAKIIKLTALILALAIAVGTAVVAGVLGMPLMAIATGAALLAAVV LSCLLLRRREPSKPTEELLGPQKHVPKDIAAQVQPSVPLDYQKLLRNEWTLVNTLSEINISWTLQDPNQRYYVWEHQGAP ITLVATTGDIAKPRLKTSGRVMIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRTSGGKINTGKGLSVGECRSAPWINR DWTNK >Mature_244_residues TKTTSIPDVHENQSHLSVDERLISESPVLTKKEVIAKIIKLTALILALAIAVGTAVVAGVLGMPLMAIATGAALLAAVVL SCLLLRRREPSKPTEELLGPQKHVPKDIAAQVQPSVPLDYQKLLRNEWTLVNTLSEINISWTLQDPNQRYYVWEHQGAPI TLVATTGDIAKPRLKTSGRVMIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRTSGGKINTGKGLSVGECRSAPWINRD WTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26340; Mature: 26209
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTTSIPDVHENQSHLSVDERLISESPVLTKKEVIAKIIKLTALILALAIAVGTAVVAG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGMPLMAIATGAALLAAVVLSCLLLRRREPSKPTEELLGPQKHVPKDIAAQVQPSVPLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCCHHHHHHCCCCCCCC YQKLLRNEWTLVNTLSEINISWTLQDPNQRYYVWEHQGAPITLVATTGDIAKPRLKTSGR HHHHHHCCCHHEEHHHHCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCC VMIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRTSGGKINTGKGLSVGECRSAPWINR EEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC DWTNK CCCCC >Mature Secondary Structure TKTTSIPDVHENQSHLSVDERLISESPVLTKKEVIAKIIKLTALILALAIAVGTAVVAG CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGMPLMAIATGAALLAAVVLSCLLLRRREPSKPTEELLGPQKHVPKDIAAQVQPSVPLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCCHHHHHHCCCCCCCC YQKLLRNEWTLVNTLSEINISWTLQDPNQRYYVWEHQGAPITLVATTGDIAKPRLKTSGR HHHHHHCCCHHEEHHHHCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCC VMIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRTSGGKINTGKGLSVGECRSAPWINR EEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC DWTNK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA