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The map label for this gene is recR

Identifier: 15835834

GI number: 15835834

Start: 336438

End: 337040

Strand: Direct

Name: recR

Synonym: CPj0299

Alternate gene names: 15835834

Gene position: 336438-337040 (Clockwise)

Preceding gene: 15835829

Following gene: 15835835

Centisome position: 27.43

GC content: 36.32

Gene sequence:

>603_bases
ATGACAAGATATCCAGATTACTTATCTAAATTAATTTTCTTTTTACGAAAACTTCCAGGAATTGGATTTAAAACAGCAGA
AAAACTTGCTTTTGAACTCATCTCTTGGGACAGCGAACAATTAAAAATATTAGGTAACGCTTTTCATAATGTTGCTAGTG
AGCGTAGTCACTGTCCCCTATGTTTTACTCTCAAAGAATCTAAAGAGGCAGACTGTCACTTTTGTAGAGAAGAAAGAGAT
AACCAAAGTCTATGTATTGTCGCTTCTCCAAAAGATGTTTTCTTTCTAGAACGTTCTAAAGTATTCAAGGGACGTTATCA
TGTTCTTGGTTCACTCTTATCGCCCATTACAGGGAAACATATAGAAAACGAGCGTCTCTCCATTTTAAAATCACGCATAG
AAACGCTATGCCCAAAAGAAATTATCCTAGCCATTGATGCAACCTTAGAAGGAGATGCTACTGCCCTTTTTCTAAAACAA
GAATTACAACATTTCTCTGTAAATATTTCCCGTCTAGCTTTAGGTCTTCCTATAGGCTTATCTTTTGATTATGTAGATTC
AGGGACACTGGCAAGAGCTTTTTCTGGACGACACTCCTATTAG

Upstream 100 bases:

>100_bases
CCACATATAAAGAAAAAAGCTAGTATACTATTCAGAGAGTTTATACTCTAACCTTAATTTAGGCCCCAGACCCGAATGTA
AAAATAAAATTCACATCACT

Downstream 100 bases:

>100_bases
CAGCTCTCTTATCCTAAAAGTAAACAAGGTTCTCTTCTATGCTAGTCTTTCTTACTTTCCCCTAGGACACAGTGAATTAT
CGAATTTGCCTTAAAACCAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFTLKESKEADCHFCREERD
NQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIENERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQ
ELQHFSVNISRLALGLPIGLSFDYVDSGTLARAFSGRHSY

Sequences:

>Translated_200_residues
MTRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFTLKESKEADCHFCREERD
NQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIENERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQ
ELQHFSVNISRLALGLPIGLSFDYVDSGTLARAFSGRHSY
>Mature_199_residues
TRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPLCFTLKESKEADCHFCREERDN
QSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKHIENERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQE
LQHFSVNISRLALGLPIGLSFDYVDSGTLARAFSGRHSY

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=36.2694300518135, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CHLPN (Q9Z8N9)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   C72094
- PIR:   C86528
- RefSeq:   NP_224504.1
- RefSeq:   NP_300358.1
- RefSeq:   NP_445007.1
- RefSeq:   NP_876584.1
- ProteinModelPortal:   Q9Z8N9
- SMR:   Q9Z8N9
- GeneID:   1466991
- GeneID:   895111
- GeneID:   919082
- GeneID:   963749
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0459
- KEGG:   cpn:CPn0299
- KEGG:   cpt:CpB0308
- TIGR:   CP_0459
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   CPNE115711:CP_0459-MONOMER
- BioCyc:   CPNE115713:CPN0299-MONOMER
- BioCyc:   CPNE138677:CPJ0299-MONOMER
- BioCyc:   CPNE182082:CPB0308-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22656; Mature: 22525

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPL
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE
CFTLKESKEADCHFCREERDNQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKH
EEEECCCCCCHHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
IENERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQELQHFSVNISRLALGLPIGL
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCC
SFDYVDSGTLARAFSGRHSY
EECCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
TRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHNVASERSHCPL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE
CFTLKESKEADCHFCREERDNQSLCIVASPKDVFFLERSKVFKGRYHVLGSLLSPITGKH
EEEECCCCCCHHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
IENERLSILKSRIETLCPKEIILAIDATLEGDATALFLKQELQHFSVNISRLALGLPIGL
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCC
SFDYVDSGTLARAFSGRHSY
EECCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362