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The map label for this gene is ywlC

Identifier: 15835805

GI number: 15835805

Start: 302087

End: 302947

Strand: Reverse

Name: ywlC

Synonym: CPj0270

Alternate gene names: 15835805

Gene position: 302947-302087 (Counterclockwise)

Preceding gene: 15835807

Following gene: 15835804

Centisome position: 24.7

GC content: 37.51

Gene sequence:

>861_bases
GTGCCTGATAAAAAAGCACAGATTACTTTTTCGCTTCCAGAGGTTATGTCAGCTATACATCAAGGGAAAATTGTCGCTCT
TCCTACTGACACTGTCTATGGGTTTGTTCTTAGCTTGTATGCCTCTGAAGCTGAAGAAAGACTCTATGCTTTAAAAGATA
GAGAACCTAGTAAAGCTTTTGCCCTTTATGTAAATTCTATTGAAGATATTGAAAACATTTCTGGTTATCCCTTATCTCCT
ACAGCTAAGAAATTAGCTCAACTTTTCCCAGGAGCAATTACTTTAGTAGTTAAGCACCGCAATCCTAGATTCCCTAAAGA
AACACTAGCGTTTCGCATTGTAGATCACTCTGTAGTTCGGGAAATTGTGGATCACTGTGGAACCTTAATCGGAACATCTG
CGAATCTTTCAGAGTTTCCTTCAGCTCTTACAGCTCAAGAGATATTCGCAGACTTTGCTGATCATGATCTCTGTATTTTT
GATGGCCCTTGTTCCCATGGTTTAGAGTCCACAGTAGTTGCCTCAGATCCTCTTTATATTTATCGTGAGGGGCTGATTTC
TCGCAGTGTTATAGAAAACATTGCAGGGACTGAAGCTAAGATTTTTCATAGAACGTCACATGCCTTTTCGAAGCATATCA
AGATCTATACAGTGAAAAATCAAGAGCAATTAGTATCTTTTTTGAGCGGATCTTTAGATTTTAAAGGTGTGGTTTGTGAA
CATCCTAAACCTAAGAATTTTTATACCAGATTACGGGAAGCTTTAAAAAAGAAAACTCCTTCTATAGTCTTTATTTATGA
TATAAATACATCGGATTATCCCGAACTTTTCCCCTTTCTTTCCCCTTATTATATTGAGTAG

Upstream 100 bases:

>100_bases
AATTCTCTTTTTGATAAAGAGCGTACAAATTATATGTATAAGCGGTTTTGTGCGGATTCTAAAAAACATAGACCTTCTTT
AATCTATTTTTGGAGTTATT

Downstream 100 bases:

>100_bases
CATTTAGGTGTGTTATGACTATCGATATGCATTGTGACTTACTTTCGCATCCGCATTTTTGTCGGAAAGATCCTGCGGTG
AGGTGTTCTCCAGAACAACT

Product: SuA5 superfamily-related protein

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein YwlC [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPDKKAQITFSLPEVMSAIHQGKIVALPTDTVYGFVLSLYASEAEERLYALKDREPSKAFALYVNSIEDIENISGYPLSP
TAKKLAQLFPGAITLVVKHRNPRFPKETLAFRIVDHSVVREIVDHCGTLIGTSANLSEFPSALTAQEIFADFADHDLCIF
DGPCSHGLESTVVASDPLYIYREGLISRSVIENIAGTEAKIFHRTSHAFSKHIKIYTVKNQEQLVSFLSGSLDFKGVVCE
HPKPKNFYTRLREALKKKTPSIVFIYDINTSDYPELFPFLSPYYIE

Sequences:

>Translated_286_residues
MPDKKAQITFSLPEVMSAIHQGKIVALPTDTVYGFVLSLYASEAEERLYALKDREPSKAFALYVNSIEDIENISGYPLSP
TAKKLAQLFPGAITLVVKHRNPRFPKETLAFRIVDHSVVREIVDHCGTLIGTSANLSEFPSALTAQEIFADFADHDLCIF
DGPCSHGLESTVVASDPLYIYREGLISRSVIENIAGTEAKIFHRTSHAFSKHIKIYTVKNQEQLVSFLSGSLDFKGVVCE
HPKPKNFYTRLREALKKKTPSIVFIYDINTSDYPELFPFLSPYYIE
>Mature_285_residues
PDKKAQITFSLPEVMSAIHQGKIVALPTDTVYGFVLSLYASEAEERLYALKDREPSKAFALYVNSIEDIENISGYPLSPT
AKKLAQLFPGAITLVVKHRNPRFPKETLAFRIVDHSVVREIVDHCGTLIGTSANLSEFPSALTAQEIFADFADHDLCIFD
GPCSHGLESTVVASDPLYIYREGLISRSVIENIAGTEAKIFHRTSHAFSKHIKIYTVKNQEQLVSFLSGSLDFKGVVCEH
PKPKNFYTRLREALKKKTPSIVFIYDINTSDYPELFPFLSPYYIE

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (Probable) [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR005145
- InterPro:   IPR004388
- InterPro:   IPR006070
- InterPro:   IPR010923 [H]

Pfam domain/function: PF03481 SUA5; PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 32083; Mature: 31952

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKKAQITFSLPEVMSAIHQGKIVALPTDTVYGFVLSLYASEAEERLYALKDREPSKAF
CCCCCCEEEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ALYVNSIEDIENISGYPLSPTAKKLAQLFPGAITLVVKHRNPRFPKETLAFRIVDHSVVR
EEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
EIVDHCGTLIGTSANLSEFPSALTAQEIFADFADHDLCIFDGPCSHGLESTVVASDPLYI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCHHH
YREGLISRSVIENIAGTEAKIFHRTSHAFSKHIKIYTVKNQEQLVSFLSGSLDFKGVVCE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCEEEC
HPKPKNFYTRLREALKKKTPSIVFIYDINTSDYPELFPFLSPYYIE
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCEECC
>Mature Secondary Structure 
PDKKAQITFSLPEVMSAIHQGKIVALPTDTVYGFVLSLYASEAEERLYALKDREPSKAF
CCCCCEEEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ALYVNSIEDIENISGYPLSPTAKKLAQLFPGAITLVVKHRNPRFPKETLAFRIVDHSVVR
EEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
EIVDHCGTLIGTSANLSEFPSALTAQEIFADFADHDLCIFDGPCSHGLESTVVASDPLYI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCHHH
YREGLISRSVIENIAGTEAKIFHRTSHAFSKHIKIYTVKNQEQLVSFLSGSLDFKGVVCE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCEEEC
HPKPKNFYTRLREALKKKTPSIVFIYDINTSDYPELFPFLSPYYIE
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]