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The map label for this gene is ubiD

Identifier: 15835799

GI number: 15835799

Start: 296774

End: 297352

Strand: Reverse

Name: ubiD

Synonym: CPj0264

Alternate gene names: 15835799

Gene position: 297352-296774 (Counterclockwise)

Preceding gene: 15835800

Following gene: 15835795

Centisome position: 24.24

GC content: 39.55

Gene sequence:

>579_bases
ATGAAGCGTTATGTTGTGGGCATTTCAGGTGCCTCTGGGGTAATACTAGCTGTTAAGCTTATTAAGGAACTCGTAAATGC
AAAACATCAAGTTGAAGTAATTATTTCTCCTTCAGGAAGAAAGACGTTGTATTATGAACTAGGGTGTCAGTCTTTTGACG
CATTATTTTCAGAAGAAAACTTAGAGTATATTCATACTCATAGCATTCAAGCTATAGAGAGCTCTTTAGCGTCAGGATCT
TGTCCTGTAGAAGCTACGATCATTATTCCTTGCAGTATGACTACAGTTGCAGCTATTTCCATAGGTTTAGCAGATAATTT
ACTGCGACGTGTTGCTGATGTGGCTCTTAAAGAAAGGCGACCCTTGATTCTTGTCCCTAGAGAGACCCCTTTGCATACGA
TCCATTTAGAAAATCTCTTAAAATTAAGCAAGAGTGGGGCAACGATTTTTCCGCCGATGCCTATGTGGTACTTTAAGCCT
CAATCGGTTGAAGATCTTGAAAATGCTTTAGTAGGAAAAATCCTTGCTTATCTAAATATCCCTAGCGACCTAACGAAACA
ATGGTCGAATCCAGAGTGA

Upstream 100 bases:

>100_bases
GTAAAAAAGATCAAGAAGGAGAGAGCAAATTCTTTTTAGCGAATATTGCGATTGCTCTATCGTTTCTTGTAAGTATGACT
TTGTTTTGGAGTTTGAGTAG

Downstream 100 bases:

>100_bases
TTCTTTCAAGGATTAAGTTCGTCTACCATTGATTACCTCATGGAGGTTCTCAATGGCGATAAATGCTGAGGGATCTTCTC
TATGAACGATTTCTTTTAGT

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: 4-hydroxybenzoate DC

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKRYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEENLEYIHTHSIQAIESSLASGS
CPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERRPLILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKP
QSVEDLENALVGKILAYLNIPSDLTKQWSNPE

Sequences:

>Translated_192_residues
MKRYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEENLEYIHTHSIQAIESSLASGS
CPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERRPLILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKP
QSVEDLENALVGKILAYLNIPSDLTKQWSNPE
>Mature_192_residues
MKRYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEENLEYIHTHSIQAIESSLASGS
CPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERRPLILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKP
QSVEDLENALVGKILAYLNIPSDLTKQWSNPE

Specific function: Catalyzes the reversible decarboxylation of 4- hydroxybenzoate

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family

Homologues:

Organism=Escherichia coli, GI1788650, Length=195, Percent_Identity=39.4871794871795, Blast_Score=138, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6320746, Length=189, Percent_Identity=40.7407407407407, Blast_Score=148, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BSDB_CHLPN (Q9Z8S4)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   H72099
- PIR:   H86523
- RefSeq:   NP_224469.1
- RefSeq:   NP_300323.1
- RefSeq:   NP_445044.1
- RefSeq:   NP_876547.1
- ProteinModelPortal:   Q9Z8S4
- SMR:   Q9Z8S4
- GeneID:   1466954
- GeneID:   894832
- GeneID:   919046
- GeneID:   962758
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- KEGG:   cpa:CP0497
- KEGG:   cpn:CPn0264
- KEGG:   cpt:CpB0271
- TIGR:   CP_0497
- HOGENOM:   HBG297290
- OMA:   IFPPMPM
- PhylomeDB:   Q9Z8S4
- ProtClustDB:   PRK05920
- BioCyc:   CPNE115711:CP_0497-MONOMER
- BioCyc:   CPNE115713:CPN0264-MONOMER
- BioCyc:   CPNE138677:CPJ0264-MONOMER
- BioCyc:   CPNE182082:CPB0271-MONOMER
- InterPro:   IPR003382
- InterPro:   IPR004507
- Gene3D:   G3DSA:3.40.50.1950
- TIGRFAMs:   TIGR00421

Pfam domain/function: PF02441 Flavoprotein; SSF52507 Flavoprotein

EC number: =4.1.1.61

Molecular weight: Translated: 21167; Mature: 21167

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: BINDING 36-36 BINDING 127-127

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEEN
CCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCHHHHHHCCCC
LEYIHTHSIQAIESSLASGSCPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERR
CEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKPQSVEDLENALVGKILAYLNI
CEEEECCCCCCEEEEHHHHHHHHCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
PSDLTKQWSNPE
CHHHHHCCCCCC
>Mature Secondary Structure
MKRYVVGISGASGVILAVKLIKELVNAKHQVEVIISPSGRKTLYYELGCQSFDALFSEEN
CCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCHHHHHHCCCC
LEYIHTHSIQAIESSLASGSCPVEATIIIPCSMTTVAAISIGLADNLLRRVADVALKERR
CEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLILVPRETPLHTIHLENLLKLSKSGATIFPPMPMWYFKPQSVEDLENALVGKILAYLNI
CEEEECCCCCCEEEEHHHHHHHHCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
PSDLTKQWSNPE
CHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362