| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835765
GI number: 15835765
Start: 267195
End: 267875
Strand: Reverse
Name: Not Available
Synonym: CPj0230
Alternate gene names: NA
Gene position: 267875-267195 (Counterclockwise)
Preceding gene: 15835766
Following gene: 15835763
Centisome position: 21.84
GC content: 39.06
Gene sequence:
>681_bases ATGAGTTCACAGCCTCTGGTCACCACTTCCTCTTCTTTAAGCCGTTATGTTGTACTTACTGGGGAGGAGAAAGTAGCTTG CTACAAGAAAGCCTTTAATCATATTTGGCATGGGGCTCCTGCTATAATTTTAGCAGCAGCACTTCTCATGTTTTGTATTT TTGGTTTTGTTTTAGGATCTATACTTTTGGGTGCTCCTCTGGAAGGTGCATCTATTCTTTATGATGTGATTCTTCCCTGG CTATTACCCTCGATTCTCGTTTTTGTTCTTCTTGTTTTGCCTTTGAATATCTATGCTTATTCCCACCATAAGCAAGTGTT GGCTCTCCATGAGAGGATTACACAGAGCAATTACAAAGAAATCTATGACCACTGTGAAAAAGAAAAGAAAACTCCTAATA AGAAAGCTCTTTCTCTCTACATAGAATCTCAGGTGCTAGTACCTGAGTATAGCAAAAGATTCTCTTCTATGATCTTAGGT AAGACGCTTAAAATCATTCCAAAAAAGGATTCTCCTGAATCTTTAAAACATGATGAGCTGATACAAAAAGCTTTAGAGCG TGCTAAGGAGAATATCTACATGAACAAGAACCAAAGAGAAAAGCGTGACGAACGCGAAGCTAAGAAAGAAGCAAAAAACG CCTCAAAAACCAATCCCTTATGGGAGGGGTTAGGCACGTAA
Upstream 100 bases:
>100_bases TTAAGAACAAAACACTCACTCCTGTTCCTCTGGATCCTTCAATGAGACCTTTAAATAATGGGCTATGTTTCATTAAAGAT TTAAAAAAGCACTTATATAC
Downstream 100 bases:
>100_bases GCTTCTCTTTTAGAGTTTGCGTTTAGTTCTTCGTCTCTTTCCTATAGATAGAATAATTAGAATGAGTCCTGTAACGATGA TCGGCAAGAACATGGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSSQPLVTTSSSLSRYVVLTGEEKVACYKKAFNHIWHGAPAIILAAALLMFCIFGFVLGSILLGAPLEGASILYDVILPW LLPSILVFVLLVLPLNIYAYSHHKQVLALHERITQSNYKEIYDHCEKEKKTPNKKALSLYIESQVLVPEYSKRFSSMILG KTLKIIPKKDSPESLKHDELIQKALERAKENIYMNKNQREKRDEREAKKEAKNASKTNPLWEGLGT
Sequences:
>Translated_226_residues MSSQPLVTTSSSLSRYVVLTGEEKVACYKKAFNHIWHGAPAIILAAALLMFCIFGFVLGSILLGAPLEGASILYDVILPW LLPSILVFVLLVLPLNIYAYSHHKQVLALHERITQSNYKEIYDHCEKEKKTPNKKALSLYIESQVLVPEYSKRFSSMILG KTLKIIPKKDSPESLKHDELIQKALERAKENIYMNKNQREKRDEREAKKEAKNASKTNPLWEGLGT >Mature_225_residues SSQPLVTTSSSLSRYVVLTGEEKVACYKKAFNHIWHGAPAIILAAALLMFCIFGFVLGSILLGAPLEGASILYDVILPWL LPSILVFVLLVLPLNIYAYSHHKQVLALHERITQSNYKEIYDHCEKEKKTPNKKALSLYIESQVLVPEYSKRFSSMILGK TLKIIPKKDSPESLKHDELIQKALERAKENIYMNKNQREKRDEREAKKEAKNASKTNPLWEGLGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25625; Mature: 25494
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQPLVTTSSSLSRYVVLTGEEKVACYKKAFNHIWHGAPAIILAAALLMFCIFGFVLGS CCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ILLGAPLEGASILYDVILPWLLPSILVFVLLVLPLNIYAYSHHKQVLALHERITQSNYKE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYDHCEKEKKTPNKKALSLYIESQVLVPEYSKRFSSMILGKTLKIIPKKDSPESLKHDEL HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH IQKALERAKENIYMNKNQREKRDEREAKKEAKNASKTNPLWEGLGT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC >Mature Secondary Structure SSQPLVTTSSSLSRYVVLTGEEKVACYKKAFNHIWHGAPAIILAAALLMFCIFGFVLGS CCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ILLGAPLEGASILYDVILPWLLPSILVFVLLVLPLNIYAYSHHKQVLALHERITQSNYKE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYDHCEKEKKTPNKKALSLYIESQVLVPEYSKRFSSMILGKTLKIIPKKDSPESLKHDEL HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH IQKALERAKENIYMNKNQREKRDEREAKKEAKNASKTNPLWEGLGT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA