Click here to switch to the map view.

The map label for this gene is oppA_1

Identifier: 15835730

GI number: 15835730

Start: 233805

End: 235403

Strand: Direct

Name: oppA_1

Synonym: CPj0195

Alternate gene names: 15835730

Gene position: 233805-235403 (Clockwise)

Preceding gene: 15835729

Following gene: 15835731

Centisome position: 19.06

GC content: 40.71

Gene sequence:

>1599_bases
ATGCGCAAGATATCAGTGGGAATCTGTATCACCATTCTCCTTAGCCTCTCCGTAGTCCTCCAAGGCTGCAAGGAGTCCAG
TCACTCCTCTACATCTCGGGGAGAACTCGCTATTAATATAAGAGATGAACCCCGTTCTTTAGATCCAAGACAAGTGCGAC
TTCTTTCAGAAATCAGCCTTGTCAAACATATCTATGAGGGATTAGTTCAAGAAAATAATCTTTCAGGAAATATAGAGCCT
GCTCTTGCAGAAGACTACTCTCTTTCCTCGGACGGACTCACTTATACTTTTAAACTGAAATCAGCTTTTTGGAGTAATGG
CGACCCCTTAACAGCTGAAGACTTTATAGAATCTTGGAAACAAGTAGCTACTCAAGAAGTCTCAGGAATCTATGCTTTTG
CCTTGAATCCAATTAAAAATGTACGAAAGATCCAAGAGGGACACCTCTCCATAGACCATTTTGGAGTGCACTCTCCTAAT
GAATCTACACTTGTTGTTACCCTGGAATCCCCAACCTCGCATTTCTTAAAACTTTTAGCTCTTCCAGTCTTTTTCCCCGT
TCATAAATCTCAAAGAACCCTGCAATCCAAATCTCTACCTATAGCAAGCGGAGCTTTCTATCCTAAAAATATCAAACAAA
AACAATGGATAAAACTCTCAAAAAACCCTCACTACTATAATCAAAGTCAGGTGGAAACTAAAACGATTACGATTCACTTC
ATTCCCGATGCAAACACAGCAGCAAAACTATTTAATCAGGGAAAACTCAATTGGCAAGGACCTCCTTGGGGAGAACGCAT
TCCTCAAGAAACCCTATCCAATTTACAGTCTAAGGGGCACTTACACTCTTTTGATGTCGCAGGAACCTCATGGCTCACCT
TCAATATCAATAAATTCCCCCTCAACAATATGAAGCTTAGAGAAGCCTTAGCATCAGCCTTAGATAAGGAAGCTCTTGTC
TCAACTATATTCTTAGGCCGTGCAAAAACTGCCGATCATCTCCTACCTACAAATATTCATAGCTATCCCGAACATCAAAA
ACAAGAGATGGCACAACGCCAAGCTTACGCTAAAAAACTCTTTAAAGAAGCTTTAGAAGAACTCCAAATCACCGCTAAAG
ATCTCGAACATCTTAATCTTATCTTTCCCGTTTCCTCGTCAGCAAGTTCTTTACTAGTCCAACTTATACGAGAACAGTGG
AAAGAAAGTTTAGGGTTCGCTATCCCTATTGTCGGAAAGGAATTTGCTCTTCTCCAAGCAGACCTATCTTCAGGGAACTT
CTCTTTAGCTACAGGAGGATGGTTCGCAGACTTTGCTGATCCTATGGCATTTCTAACGATCTTTGCTTATCCATCAGGAG
TTCCTCCTTATGCAATCAACCATAAGGACTTCCTAGAAATTCTACAAAACATAGAACAAGAGCAAGATCACCAAAAACGC
TCGGAATTAGTGTCGCAAGCTTCTCTTTACCTAGAGACCTTTCATATTATTGAGCCGATCTACCACGACGCATTTCAATT
TGCTATGAATAAAAAACTTTCTAATCTAGGAGTCTCACCAACAGGAGTTGTGGACTTCCGTTATGCTAAGGAAAATTAG

Upstream 100 bases:

>100_bases
ACTTCCCCCCTGCTAAACTATGCTCAGATAATGCTGCTATGATTGCAGGTCTAGGGGGAGAAAATTTTCAAAAAAACTCT
AGTATTCCGGAAATTCGTAT

Downstream 100 bases:

>100_bases
CACCTCTTTTAATCTCGCAAACTTGTCAAGAACTGAATCTTATACTAAACTGGGTGCCTTTGTGGCACCTCGTTTCCTTC
TGACTGCTCTTCTCTCTCTA

Product: oligopeptide binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MRKISVGICITILLSLSVVLQGCKESSHSSTSRGELAINIRDEPRSLDPRQVRLLSEISLVKHIYEGLVQENNLSGNIEP
ALAEDYSLSSDGLTYTFKLKSAFWSNGDPLTAEDFIESWKQVATQEVSGIYAFALNPIKNVRKIQEGHLSIDHFGVHSPN
ESTLVVTLESPTSHFLKLLALPVFFPVHKSQRTLQSKSLPIASGAFYPKNIKQKQWIKLSKNPHYYNQSQVETKTITIHF
IPDANTAAKLFNQGKLNWQGPPWGERIPQETLSNLQSKGHLHSFDVAGTSWLTFNINKFPLNNMKLREALASALDKEALV
STIFLGRAKTADHLLPTNIHSYPEHQKQEMAQRQAYAKKLFKEALEELQITAKDLEHLNLIFPVSSSASSLLVQLIREQW
KESLGFAIPIVGKEFALLQADLSSGNFSLATGGWFADFADPMAFLTIFAYPSGVPPYAINHKDFLEILQNIEQEQDHQKR
SELVSQASLYLETFHIIEPIYHDAFQFAMNKKLSNLGVSPTGVVDFRYAKEN

Sequences:

>Translated_532_residues
MRKISVGICITILLSLSVVLQGCKESSHSSTSRGELAINIRDEPRSLDPRQVRLLSEISLVKHIYEGLVQENNLSGNIEP
ALAEDYSLSSDGLTYTFKLKSAFWSNGDPLTAEDFIESWKQVATQEVSGIYAFALNPIKNVRKIQEGHLSIDHFGVHSPN
ESTLVVTLESPTSHFLKLLALPVFFPVHKSQRTLQSKSLPIASGAFYPKNIKQKQWIKLSKNPHYYNQSQVETKTITIHF
IPDANTAAKLFNQGKLNWQGPPWGERIPQETLSNLQSKGHLHSFDVAGTSWLTFNINKFPLNNMKLREALASALDKEALV
STIFLGRAKTADHLLPTNIHSYPEHQKQEMAQRQAYAKKLFKEALEELQITAKDLEHLNLIFPVSSSASSLLVQLIREQW
KESLGFAIPIVGKEFALLQADLSSGNFSLATGGWFADFADPMAFLTIFAYPSGVPPYAINHKDFLEILQNIEQEQDHQKR
SELVSQASLYLETFHIIEPIYHDAFQFAMNKKLSNLGVSPTGVVDFRYAKEN
>Mature_532_residues
MRKISVGICITILLSLSVVLQGCKESSHSSTSRGELAINIRDEPRSLDPRQVRLLSEISLVKHIYEGLVQENNLSGNIEP
ALAEDYSLSSDGLTYTFKLKSAFWSNGDPLTAEDFIESWKQVATQEVSGIYAFALNPIKNVRKIQEGHLSIDHFGVHSPN
ESTLVVTLESPTSHFLKLLALPVFFPVHKSQRTLQSKSLPIASGAFYPKNIKQKQWIKLSKNPHYYNQSQVETKTITIHF
IPDANTAAKLFNQGKLNWQGPPWGERIPQETLSNLQSKGHLHSFDVAGTSWLTFNINKFPLNNMKLREALASALDKEALV
STIFLGRAKTADHLLPTNIHSYPEHQKQEMAQRQAYAKKLFKEALEELQITAKDLEHLNLIFPVSSSASSLLVQLIREQW
KESLGFAIPIVGKEFALLQADLSSGNFSLATGGWFADFADPMAFLTIFAYPSGVPPYAINHKDFLEILQNIEQEQDHQKR
SELVSQASLYLETFHIIEPIYHDAFQFAMNKKLSNLGVSPTGVVDFRYAKEN

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=512, Percent_Identity=26.171875, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI1787495, Length=516, Percent_Identity=25.1937984496124, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1789397, Length=479, Percent_Identity=26.5135699373695, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1789887, Length=483, Percent_Identity=24.6376811594203, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789966, Length=491, Percent_Identity=23.8289205702648, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787762, Length=530, Percent_Identity=22.8301886792453, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787052, Length=367, Percent_Identity=22.8882833787466, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59745; Mature: 59745

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKISVGICITILLSLSVVLQGCKESSHSSTSRGELAINIRDEPRSLDPRQVRLLSEISL
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
VKHIYEGLVQENNLSGNIEPALAEDYSLSSDGLTYTFKLKSAFWSNGDPLTAEDFIESWK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCCHHHHHHHHH
QVATQEVSGIYAFALNPIKNVRKIQEGHLSIDHFGVHSPNESTLVVTLESPTSHFLKLLA
HHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHH
LPVFFPVHKSQRTLQSKSLPIASGAFYPKNIKQKQWIKLSKNPHYYNQSQVETKTITIHF
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCEEEEEEEEEE
IPDANTAAKLFNQGKLNWQGPPWGERIPQETLSNLQSKGHLHSFDVAGTSWLTFNINKFP
ECCCCHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC
LNNMKLREALASALDKEALVSTIFLGRAKTADHLLPTNIHSYPEHQKQEMAQRQAYAKKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKEALEELQITAKDLEHLNLIFPVSSSASSLLVQLIREQWKESLGFAIPIVGKEFALLQA
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEE
DLSSGNFSLATGGWFADFADPMAFLTIFAYPSGVPPYAINHKDFLEILQNIEQEQDHQKR
ECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SELVSQASLYLETFHIIEPIYHDAFQFAMNKKLSNLGVSPTGVVDFRYAKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRKISVGICITILLSLSVVLQGCKESSHSSTSRGELAINIRDEPRSLDPRQVRLLSEISL
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
VKHIYEGLVQENNLSGNIEPALAEDYSLSSDGLTYTFKLKSAFWSNGDPLTAEDFIESWK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCCHHHHHHHHH
QVATQEVSGIYAFALNPIKNVRKIQEGHLSIDHFGVHSPNESTLVVTLESPTSHFLKLLA
HHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHH
LPVFFPVHKSQRTLQSKSLPIASGAFYPKNIKQKQWIKLSKNPHYYNQSQVETKTITIHF
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCEEEEEEEEEE
IPDANTAAKLFNQGKLNWQGPPWGERIPQETLSNLQSKGHLHSFDVAGTSWLTFNINKFP
ECCCCHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC
LNNMKLREALASALDKEALVSTIFLGRAKTADHLLPTNIHSYPEHQKQEMAQRQAYAKKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FKEALEELQITAKDLEHLNLIFPVSSSASSLLVQLIREQWKESLGFAIPIVGKEFALLQA
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEE
DLSSGNFSLATGGWFADFADPMAFLTIFAYPSGVPPYAINHKDFLEILQNIEQEQDHQKR
ECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SELVSQASLYLETFHIIEPIYHDAFQFAMNKKLSNLGVSPTGVVDFRYAKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]