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The map label for this gene is glnP

Identifier: 15835727

GI number: 15835727

Start: 231596

End: 232249

Strand: Reverse

Name: glnP

Synonym: CPj0192

Alternate gene names: 15835727

Gene position: 232249-231596 (Counterclockwise)

Preceding gene: 15835728

Following gene: 15835726

Centisome position: 18.93

GC content: 35.78

Gene sequence:

>654_bases
GTGGATCATTGGCTAGCTATAGCAAGACTGTTGTTAAGAGGATGCGGATACACCTTATGTGTGAGCGGAATCGGCATTCT
ATGTGGTTCTATTTTAGGTCTTTTGATTGGAACGGTGACTTCTCTATACTTCCCTTCTAAGTTAACGAAACTTTTAGCTA
ATAGTTATGTGACTGTTATCCGCGGGACTCCTTTATTTATTCAAATTTTGATTATATATTTTGGATTGCCTGAAGTTCTC
CCCATAGAACCCACACCTCTAGTTGCTGGAATTATTGCTTTAAGTATGAATTCTGCAGCATATCTTGCAGAAAATATCCG
TGGAGGTATCAATTCTCTTTCTATAGGGCAGTGGGAATCCGCAATGGTTTTGGGATATAAGAAGTATCAAATTTTCGTTT
ATATTATTTATCCTCAAGTTTTTAAAAATATTTTACCATCCTTAACCAATGAATTTGTTTCTTTGATCAAGGAAAGTAGT
ATTTTAATGGTTGTCGGTGTCCCCGAGTTAACTAAAGTAACTAAGGATATTGTCTCGAGAGAGTTGAACCCTATGGAAAT
GTATCTTATTTGTGCTGGGCTATATTTCTTAATGACATCATCATTTTCCTGTATTTCTAGGTTATCAGAAAAGAGAAGGA
GCTATGACAATTAG

Upstream 100 bases:

>100_bases
CCCATTGTTGATGGTTTCGATTGCAAATTTACTGCAAGTTTTCTTGGATTAATTGCATAAATATGATTTCATTATAAATA
AATATGCATAAGAGGTCGGA

Downstream 100 bases:

>100_bases
AGTCCGAAACCTTGCCTACTCTGTAAATAAGAAAAAGATTCTAGATGGTGTAACTTTTTCTTTAGAGCGAGGGCACATTA
CACTGTTTGTTGGGAAGAGT

Product: ABC amino acid transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQILIIYFGLPEVL
PIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTSSFSCISRLSEKRRSYDN

Sequences:

>Translated_217_residues
MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQILIIYFGLPEVL
PIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTSSFSCISRLSEKRRSYDN
>Mature_217_residues
MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLFIQILIIYFGLPEVL
PIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESS
ILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTSSFSCISRLSEKRRSYDN

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=205, Percent_Identity=38.0487804878049, Blast_Score=140, Evalue=4e-35,
Organism=Escherichia coli, GI1787030, Length=210, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787087, Length=198, Percent_Identity=28.7878787878788, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=29.1079812206573, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788646, Length=179, Percent_Identity=26.8156424581006, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787086, Length=203, Percent_Identity=29.5566502463054, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786874, Length=207, Percent_Identity=25.6038647342995, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=29.4685990338164, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI48994930, Length=127, Percent_Identity=26.7716535433071, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24035; Mature: 24035

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPLFIQILIIYFGLPEVLPIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWES
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCH
AMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVSR
HHHEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHC
ELNPMEMYLICAGLYFLMTSSFSCISRLSEKRRSYDN
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPLFIQILIIYFGLPEVLPIEPTPLVAGIIALSMNSAAYLAENIRGGINSLSIGQWES
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCH
AMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVSR
HHHEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHC
ELNPMEMYLICAGLYFLMTSSFSCISRLSEKRRSYDN
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]