| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835722
GI number: 15835722
Start: 223871
End: 224671
Strand: Direct
Name: Not Available
Synonym: CPj0187
Alternate gene names: NA
Gene position: 223871-224671 (Clockwise)
Preceding gene: 15835721
Following gene: 15835723
Centisome position: 18.25
GC content: 39.33
Gene sequence:
>801_bases ATGCATTCAAAATTTCTTTCTCGAAGAAAAAAAAATAGTTCTCATAAGGAGGAAACCTCTTGGGATTGTATAGCCTCAAG TTACAATAAGATAGTCCAAGATAAAGGGCACTACTATCATAGAGAAACTATCCTTCCCCAACTCCTGCCTTCACTCACCT TAGGTTCAAAAAGTTCTGTATTGGATATTGGCTGCGGTCAAGGTTTTTTAGAAAGGGCCCTTCCTAAGGAATGTCGTTAT CTAGGCATAGATATCTCTTCTAGATTGATTGCTCTAGCAAAGAAAATGCGATCGGTAAACTCTCATCAGTTTAAGGTTGC AGATCTTAGCAAACGCCTAGAGTTCGTAGAACCGACATTATTCTCTCATGCAGTAGCAATCCTCTCCCTTCAAAATATGG AATTCCCCGGAGAGGCTATACGTAATACAGCTACGCTCCTCGATCCACTCGGGCAATTTTTTATAGTTTTAAGCCATCCT TGTTTTCGTATTCCTAGGGCATCATCCTGGCACTATGATGAAAATAAAAAAGCTATCTCTCGTCATATAGATCGTTATCT CTCCCCAATGAAAATCCCAATCATGGCTCACCCAGGACAAAAAGATTCGCCTTCTACCCTCTCCTTTCACTTTCCTCTAA GCTATTGGTTTAAAGAACTGTCTTCTCATGGATTCTTAGTTTCAGGTCTTGAGGAATGGACATCTTCAAAAACCTCAACA GGAAAACGAGCTAAGGCAGAAAACCTTTGTCGAAAGGAATTTCCATTATTCCTTATGATTTCATGCATTAAGATAAAATA A
Upstream 100 bases:
>100_bases AATGAACTCACTCATTAAAGATATTTGCAACAAATTTTCCTGCGTCTTATGCTTGTTCTTTTAGGATTGAGTTTTTCTCA CTTACACTAGAACCCTACCT
Downstream 100 bases:
>100_bases ATTTTTAATTATTTAATTAGGTTTTTTATTAGAATAAATAAAAAACACTAAATTCTTGCATTATGTTTCGAAAACTTTTC CCGTTTTCTAAAAAAAAAAC
Product: methylase
Products: NA
Alternate protein names: Methyltransferase; Methylase; rRNA Methylase
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHSKFLSRRKKNSSHKEETSWDCIASSYNKIVQDKGHYYHRETILPQLLPSLTLGSKSSVLDIGCGQGFLERALPKECRY LGIDISSRLIALAKKMRSVNSHQFKVADLSKRLEFVEPTLFSHAVAILSLQNMEFPGEAIRNTATLLDPLGQFFIVLSHP CFRIPRASSWHYDENKKAISRHIDRYLSPMKIPIMAHPGQKDSPSTLSFHFPLSYWFKELSSHGFLVSGLEEWTSSKTST GKRAKAENLCRKEFPLFLMISCIKIK
Sequences:
>Translated_266_residues MHSKFLSRRKKNSSHKEETSWDCIASSYNKIVQDKGHYYHRETILPQLLPSLTLGSKSSVLDIGCGQGFLERALPKECRY LGIDISSRLIALAKKMRSVNSHQFKVADLSKRLEFVEPTLFSHAVAILSLQNMEFPGEAIRNTATLLDPLGQFFIVLSHP CFRIPRASSWHYDENKKAISRHIDRYLSPMKIPIMAHPGQKDSPSTLSFHFPLSYWFKELSSHGFLVSGLEEWTSSKTST GKRAKAENLCRKEFPLFLMISCIKIK >Mature_266_residues MHSKFLSRRKKNSSHKEETSWDCIASSYNKIVQDKGHYYHRETILPQLLPSLTLGSKSSVLDIGCGQGFLERALPKECRY LGIDISSRLIALAKKMRSVNSHQFKVADLSKRLEFVEPTLFSHAVAILSLQNMEFPGEAIRNTATLLDPLGQFFIVLSHP CFRIPRASSWHYDENKKAISRHIDRYLSPMKIPIMAHPGQKDSPSTLSFHFPLSYWFKELSSHGFLVSGLEEWTSSKTST GKRAKAENLCRKEFPLFLMISCIKIK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30360; Mature: 30360
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSKFLSRRKKNSSHKEETSWDCIASSYNKIVQDKGHYYHRETILPQLLPSLTLGSKSSV CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCE LDIGCGQGFLERALPKECRYLGIDISSRLIALAKKMRSVNSHQFKVADLSKRLEFVEPTL EECCCCCHHHHHHCHHHHHEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH FSHAVAILSLQNMEFPGEAIRNTATLLDPLGQFFIVLSHPCFRIPRASSWHYDENKKAIS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHH RHIDRYLSPMKIPIMAHPGQKDSPSTLSFHFPLSYWFKELSSHGFLVSGLEEWTSSKTST HHHHHHHCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCEEECHHHHCCCCCCC GKRAKAENLCRKEFPLFLMISCIKIK CCHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MHSKFLSRRKKNSSHKEETSWDCIASSYNKIVQDKGHYYHRETILPQLLPSLTLGSKSSV CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCE LDIGCGQGFLERALPKECRYLGIDISSRLIALAKKMRSVNSHQFKVADLSKRLEFVEPTL EECCCCCHHHHHHCHHHHHEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH FSHAVAILSLQNMEFPGEAIRNTATLLDPLGQFFIVLSHPCFRIPRASSWHYDENKKAIS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHH RHIDRYLSPMKIPIMAHPGQKDSPSTLSFHFPLSYWFKELSSHGFLVSGLEEWTSSKTST HHHHHHHCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCEEECHHHHCCCCCCC GKRAKAENLCRKEFPLFLMISCIKIK CCHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA