| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835705
GI number: 15835705
Start: 209645
End: 210649
Strand: Reverse
Name: Not Available
Synonym: CPj0170
Alternate gene names: NA
Gene position: 210649-209645 (Counterclockwise)
Preceding gene: 15835706
Following gene: 15835704
Centisome position: 17.17
GC content: 38.91
Gene sequence:
>1005_bases ATGTCTTATGATACGTTATTCAAGAATCTTGAAAAGGAAGATTCTGTACATAAGATATGCAATGAGATCTTTGCATTAGT ACCACGACTCAATACAATCGCTTGCACCGAAGCTATCATCAAAAACCTCCCCAAAGCAGATATCCATGTACACCTTCCTG GGACCATAACACCTCAATTAGCTTGGATTTTAGGTGTGAAAAATGGGTTCTTAAAATGGTCTTATAATTCTTGGACCAAT CATCGATTACTTTCTCCTAAGAATCCTCATAAACAATACTCCAATATTTTCCGAAACTTTCAAGATATCTGTCACGAAAA GGATCCGGATTTAAGTGTATTACAATATAATATCTTAAATTACGATTTTAATAGCTTTGATAGAGTGATGGCTACAGTAC AAGGACATCGCTTTCCTCCTGGAGGAATCCAAAATGAAGAAGACCTTCTTCTCATTTTCAATAACTATCTCCAGCAATGT CTGGACGATACTATCGTGTATACTGAAGTACAACAAAATATCCGCCTTGCCCATGTTTTGTATCCTTCATTACCTGAAAA GCACGCGCGTATGAAGTTTTATCAAATCTTGTATCGTGCTTCGCAAACGTTTTCAAAACACGGGATTACTTTACGATTTT TAAACTGCTTCAATAAAACATTTGCTCCACAAATAAACACACAAGAACCTGCCCAAGAAGCTGTTCAATGGCTCCAAGAG GTTGATTCTACATTTCCTGGTCTATTTGTAGGGATACAATCCGCAGGATCAGAATCTGCGCCCGGAGCCTGTCCTAAGCG ATTAGCTTCTGGATATAGAAATGCTTATGACTCAGGGTTTGGTTGTGAAGCTCATGCTGGAGAAGGCATAGAGACCCGGA CTATTTTTTCGTCAGCTAAGGTAAATCCAGAGGGATTGATCGAGATAACCCGAGTGACTTTCTCGTCTCTTAAACGAAAA CAGCCATCTAGTTTACCCATAAGAGTTACTTGCCAGTTAGGATAA
Upstream 100 bases:
>100_bases AAGACTCGTTATTTAGTAACATCATTAGAATGTTCGTAAAAATCATATCATTAGAGGAGAAAAGTATAACACTTGCACAG TTATAGCGTTCGTTCTTTCT
Downstream 100 bases:
>100_bases GTTCCAGGAGAAAAACTATAGATACGACCCACTAAATTTCCTTTTTATTTTTTATAAGTTCCTAAGACTTATAGCTTTTC TTCTTACTTTATTTCTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSYDTLFKNLEKEDSVHKICNEIFALVPRLNTIACTEAIIKNLPKADIHVHLPGTITPQLAWILGVKNGFLKWSYNSWTN HRLLSPKNPHKQYSNIFRNFQDICHEKDPDLSVLQYNILNYDFNSFDRVMATVQGHRFPPGGIQNEEDLLLIFNNYLQQC LDDTIVYTEVQQNIRLAHVLYPSLPEKHARMKFYQILYRASQTFSKHGITLRFLNCFNKTFAPQINTQEPAQEAVQWLQE VDSTFPGLFVGIQSAGSESAPGACPKRLASGYRNAYDSGFGCEAHAGEGIETRTIFSSAKVNPEGLIEITRVTFSSLKRK QPSSLPIRVTCQLG
Sequences:
>Translated_334_residues MSYDTLFKNLEKEDSVHKICNEIFALVPRLNTIACTEAIIKNLPKADIHVHLPGTITPQLAWILGVKNGFLKWSYNSWTN HRLLSPKNPHKQYSNIFRNFQDICHEKDPDLSVLQYNILNYDFNSFDRVMATVQGHRFPPGGIQNEEDLLLIFNNYLQQC LDDTIVYTEVQQNIRLAHVLYPSLPEKHARMKFYQILYRASQTFSKHGITLRFLNCFNKTFAPQINTQEPAQEAVQWLQE VDSTFPGLFVGIQSAGSESAPGACPKRLASGYRNAYDSGFGCEAHAGEGIETRTIFSSAKVNPEGLIEITRVTFSSLKRK QPSSLPIRVTCQLG >Mature_333_residues SYDTLFKNLEKEDSVHKICNEIFALVPRLNTIACTEAIIKNLPKADIHVHLPGTITPQLAWILGVKNGFLKWSYNSWTNH RLLSPKNPHKQYSNIFRNFQDICHEKDPDLSVLQYNILNYDFNSFDRVMATVQGHRFPPGGIQNEEDLLLIFNNYLQQCL DDTIVYTEVQQNIRLAHVLYPSLPEKHARMKFYQILYRASQTFSKHGITLRFLNCFNKTFAPQINTQEPAQEAVQWLQEV DSTFPGLFVGIQSAGSESAPGACPKRLASGYRNAYDSGFGCEAHAGEGIETRTIFSSAKVNPEGLIEITRVTFSSLKRKQ PSSLPIRVTCQLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37929; Mature: 37797
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDTLFKNLEKEDSVHKICNEIFALVPRLNTIACTEAIIKNLPKADIHVHLPGTITPQL CCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHH AWILGVKNGFLKWSYNSWTNHRLLSPKNPHKQYSNIFRNFQDICHEKDPDLSVLQYNILN HHEEECCCCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHC YDFNSFDRVMATVQGHRFPPGGIQNEEDLLLIFNNYLQQCLDDTIVYTEVQQNIRLAHVL CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEHHHHHHCCEEEEHH YPSLPEKHARMKFYQILYRASQTFSKHGITLRFLNCFNKTFAPQINTQEPAQEAVQWLQE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHH VDSTFPGLFVGIQSAGSESAPGACPKRLASGYRNAYDSGFGCEAHAGEGIETRTIFSSAK HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC VNPEGLIEITRVTFSSLKRKQPSSLPIRVTCQLG CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure SYDTLFKNLEKEDSVHKICNEIFALVPRLNTIACTEAIIKNLPKADIHVHLPGTITPQL CHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHH AWILGVKNGFLKWSYNSWTNHRLLSPKNPHKQYSNIFRNFQDICHEKDPDLSVLQYNILN HHEEECCCCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHC YDFNSFDRVMATVQGHRFPPGGIQNEEDLLLIFNNYLQQCLDDTIVYTEVQQNIRLAHVL CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEHHHHHHCCEEEEHH YPSLPEKHARMKFYQILYRASQTFSKHGITLRFLNCFNKTFAPQINTQEPAQEAVQWLQE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHH VDSTFPGLFVGIQSAGSESAPGACPKRLASGYRNAYDSGFGCEAHAGEGIETRTIFSSAK HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC VNPEGLIEITRVTFSSLKRKQPSSLPIRVTCQLG CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA