| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835680
GI number: 15835680
Start: 180488
End: 182083
Strand: Direct
Name: Not Available
Synonym: CPj0145
Alternate gene names: NA
Gene position: 180488-182083 (Clockwise)
Preceding gene: 15835679
Following gene: 15835681
Centisome position: 14.71
GC content: 39.47
Gene sequence:
>1596_bases ATGTTTAAGAGCTTTATAGTAAGGTATATGTTTGTAGGTGGCCTTGTTTCATTCTTGCTTCCTATCCCCGACTTGGAATG TGCGAATAATGTAACAAAAACTTATGATAAGAAAGCTTCTGTTATATCCAGAGATCTTAAGCTACAGGAAGACTGCCAGA AGTTTTGGAATCTTGATCCGTATAAACTAGAAAGTCTTTGTGCTTATCAAGTGCTTTACCATGATGACTATAGTTCCAAG AGAATACGAGAGCTTTTTCCTCAAATCCAAAAAGACGAAGTCCCCATATTTGCAACAATGATTCTTACTTTAGGGAAAGT AGACCGTGGCTTTTCTCCTGAAGAAATTTCATTGATCCAAAAACTTTCTTACCCAGGCCTCTCATTGGCTTCTTTGAGAG GGTCTACAGAAATAGACCCGAATACAGATTTGGCTCGTGCTTTAGTAGTGTCGGAGTTTTCTGGAGATTTAGGGAAGAAC CGAGCTGACTACTATAGCAATTGCCTTGATATTTTGGCGTTGCGTATTCATGCAGAACGTCAAAGGTATTTAGATCAGTC TCCTTGTGTTCCTGGAACCTCCGAGTTTCATAAGGCAACTATAGAAGCTATTAATACGATACTCTTCTATGAAGAAGCAG TTCGTTATCCTTCGAAGAAAGAAATGTTTTCTGATGAATTTTCTTTTCTTTCTTCAGTTACAGATAGAAAATTCGGCGTA TGTTTAGGGGTCTCTTCTCTTTATTTCTCTTTGTCACAGCGCTTAGATTTACCTTTAGAGGCTGTGACGCCTCCTGGGCA TATCTACTTACGTTATCAGGGTGGTGAGGTGAACATTGAGACTACAGCTGGAGGGCGCCATCTTCCTACAGCAAGTTACT GTGATTGTCTAGATTTAGAAGACCTTCAGGTGCGTACTCCTGAAGAAATGATAGGGCTTACTTTTATGAACCAGGGCTCT TTTGCTCTGCAGAAGAAAAAGTATAAGGAAGCGGAAGAGGCTTATAAAAAGGCTCAAGAGTATTTGGGAGACGAGGAACT ACAAGAGCTTTTGGGGTTTGTTCAAATCCTAGGAGGAAAGAAAAAAGAGGGGAAATCTTTGATTGGTAAAAGTCCTCGCG CTTCCCAGAAAGGATCGGTGGCTTATGACTACCTTAAAGGTAGAATCAACATTCCAACACTAGCTCTTTTATTTTCTTAT CCAGGATCCAATTATGAAGAGATAGCTTCTTATGAAGAAGAACTCAAAAAGGCTATGAAAAGCTCGATGCCATGTTGTGA AGGACAGCGTCGTCTTGCTTCAGTAGCATTTCATTTGGGGAAGACAGCGGAGGCGGTTGCTCTTTTAGAAAAATGCGTTG AGGATATCCCTAATGATCTTTCTCTTCATTTAAGGTTATGTAAAATCCTATGTGATCGACATGAGTATACAAAGGCTTTG AAATACTTCATAATTGCGGAAAGACTTATGGAGGATCAGGGATTTCTTAAAAAAGACAATCGTTCGTTCGCTTTATTTTA TGAGGTGAAAAAAATCATATCCAAAGTGGCTCCTCAAAAAGCTAACACCTTGCTTTTAATGGAGTCTGAAAGATAA
Upstream 100 bases:
>100_bases TCATAAAAAAACTAGGACGATAAAGTGTGTGTAGGATTAGAATTGTGCGGCAAGCTTCATTTGGCTAAACAAGAGCAGTC ACAGAAATTTAAGAAGTCCT
Downstream 100 bases:
>100_bases CTTGATCAGTTCTTTCTGTATTGCTCTTATTTATAACATGTTATAACATTGCAAGTGTTAATTTTTAACAGATCTTTATT TGTTGCAATATTTTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER
Sequences:
>Translated_531_residues MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER >Mature_531_residues MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER
Specific function: Unknown
COG id: COG2912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60249; Mature: 60249
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDP CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH YKLESLCAYQVLYHDDYSSKRIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH KLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKNRADYYSNCLDILALRIHAER HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLE HHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC DLQVRTPEEMIGLTFMNQGSFALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGK CCCCCCHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC KKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSYPGSNYEEIASYEEELKKAMK CCCCHHHHCCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH SSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER HHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDP CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH YKLESLCAYQVLYHDDYSSKRIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH KLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKNRADYYSNCLDILALRIHAER HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLE HHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC DLQVRTPEEMIGLTFMNQGSFALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGK CCCCCCHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC KKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSYPGSNYEEIASYEEELKKAMK CCCCHHHHCCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH SSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER HHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA