| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is yxjG_1
Identifier: 15835678
GI number: 15835678
Start: 175922
End: 177046
Strand: Reverse
Name: yxjG_1
Synonym: CPj0143
Alternate gene names: 15835678
Gene position: 177046-175922 (Counterclockwise)
Preceding gene: 15835686
Following gene: 15835677
Centisome position: 14.43
GC content: 39.47
Gene sequence:
>1125_bases ATGAATACTTCACTAAAAAGACCTCTGAAATCTCATTTTGATGTTGTCGGTAGTTTTTTGCGTCCTGAGCATTTAAAAAA AACTAGAGAAAGCCTTAAAGAAGGCTCTATTTCTCTAGATCAACTCATGCAAATTGAGGATATCGCTATCCAAGATTTGA TCAAAAAACAAAAAGCAGCAGGTCTTTCTTTTATTACTGATGGAGAATTCCGCAGAGCTACGTGGCATTACGACTTCATG TGGGGTTTTCATGGCGTAGGTCACCACAGAGCTACAGAAGGAGTTTTCTTTGATGGAGAACGCGCTATGATCGATGATAC CTATCTGACAGACAAGATCTCTGTATCTCACCACCCATTTGTGGATCACTTTAAATTTGTAAAAGCTCTAGAAGATGAAT TTACGACTGCAAAGCAAACTCTTCCTGCACCGGCACAGTTTTTAAAGCAGATGATCTTCCCTAATAATATAGAGGTCACA CGTAAATTCTATCCTACAAATCAGGAGCTAATTGAAGATATTGTTGCAGGTTATCGTAAAGTCATTCGCGATCTTTATGA TGCTGGCTGCCGCTATCTCCAATTAGATGACTGTACTCGGGGAGGTTTAGTAGACCCTCGAGTCTGTTCGTGGTATGGTA TCGATGAAAAAGGTCTTCAAGATCTGATTCAACAATATCTTCTGATTAATAATCTTGTAATTGCAGATCGTCCCGATGAT CTAGTCGTTAATTTACATGTATGCCGTGGGAACTACCACTCAAAATTCTTTGCTAGTGGTAGTTATGACTTTATTGCAAA GCCCCTATTCGAACAAACAAATGTAGACGGCTACTATTTAGAGTTTGATCATGAGCGTTCTGGAGACTTCTCTCCTCTCA CCTTCATTTCTGGAGAAAAAACTGTCTGCTTAGGTCTTGTTACCAGCAAAACCCCTACACTTGAAAATAAGGATGAGGTC ATTGCTCGCATACATCAAGCAGCAGACTACCTGCCCTTGGAAAGACTCTCTCTAAGTCCACAGTGTGGTTTTGCTTCATG TGAAATAGGAAATAAATTAACAGAAGAAGAGCAATGGGCTAAAGTTGCTCTAGTAAAAGAAATTTCCGAAGAAGTTTGGA AATAA
Upstream 100 bases:
>100_bases AAACGCCTATAACTTGTTTATTCTTATTTTTAATCCTATAGAAAATTCGACGTTTTTCTACTTAGCTCTTTCCATTTCAC TAGTCTGAAGGAGGACAATC
Downstream 100 bases:
>100_bases TGAAACCAGAGCTGGTTGGAACCTCTATAGATCCAACCAGCTCTTCCCTTTATGTACGCTATCTAGTTCGTTTTCTATCT TAATTTTAAAGTCACTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNTSLKRPLKSHFDVVGSFLRPEHLKKTRESLKEGSISLDQLMQIEDIAIQDLIKKQKAAGLSFITDGEFRRATWHYDFM WGFHGVGHHRATEGVFFDGERAMIDDTYLTDKISVSHHPFVDHFKFVKALEDEFTTAKQTLPAPAQFLKQMIFPNNIEVT RKFYPTNQELIEDIVAGYRKVIRDLYDAGCRYLQLDDCTRGGLVDPRVCSWYGIDEKGLQDLIQQYLLINNLVIADRPDD LVVNLHVCRGNYHSKFFASGSYDFIAKPLFEQTNVDGYYLEFDHERSGDFSPLTFISGEKTVCLGLVTSKTPTLENKDEV IARIHQAADYLPLERLSLSPQCGFASCEIGNKLTEEEQWAKVALVKEISEEVWK
Sequences:
>Translated_374_residues MNTSLKRPLKSHFDVVGSFLRPEHLKKTRESLKEGSISLDQLMQIEDIAIQDLIKKQKAAGLSFITDGEFRRATWHYDFM WGFHGVGHHRATEGVFFDGERAMIDDTYLTDKISVSHHPFVDHFKFVKALEDEFTTAKQTLPAPAQFLKQMIFPNNIEVT RKFYPTNQELIEDIVAGYRKVIRDLYDAGCRYLQLDDCTRGGLVDPRVCSWYGIDEKGLQDLIQQYLLINNLVIADRPDD LVVNLHVCRGNYHSKFFASGSYDFIAKPLFEQTNVDGYYLEFDHERSGDFSPLTFISGEKTVCLGLVTSKTPTLENKDEV IARIHQAADYLPLERLSLSPQCGFASCEIGNKLTEEEQWAKVALVKEISEEVWK >Mature_374_residues MNTSLKRPLKSHFDVVGSFLRPEHLKKTRESLKEGSISLDQLMQIEDIAIQDLIKKQKAAGLSFITDGEFRRATWHYDFM WGFHGVGHHRATEGVFFDGERAMIDDTYLTDKISVSHHPFVDHFKFVKALEDEFTTAKQTLPAPAQFLKQMIFPNNIEVT RKFYPTNQELIEDIVAGYRKVIRDLYDAGCRYLQLDDCTRGGLVDPRVCSWYGIDEKGLQDLIQQYLLINNLVIADRPDD LVVNLHVCRGNYHSKFFASGSYDFIAKPLFEQTNVDGYYLEFDHERSGDFSPLTFISGEKTVCLGLVTSKTPTLENKDEV IARIHQAADYLPLERLSLSPQCGFASCEIGNKLTEEEQWAKVALVKEISEEVWK
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxjH [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002629 [H]
Pfam domain/function: PF01717 Meth_synt_2 [H]
EC number: NA
Molecular weight: Translated: 42846; Mature: 42846
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSLKRPLKSHFDVVGSFLRPEHLKKTRESLKEGSISLDQLMQIEDIAIQDLIKKQKAA CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GLSFITDGEFRRATWHYDFMWGFHGVGHHRATEGVFFDGERAMIDDTYLTDKISVSHHPF CCEEEECCCCEEEEEEEEEHHCCCCCCCCCCCCCEEECCCEEEECCCCCCCEEECCCCCH VDHFKFVKALEDEFTTAKQTLPAPAQFLKQMIFPNNIEVTRKFYPTNQELIEDIVAGYRK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH VIRDLYDAGCRYLQLDDCTRGGLVDPRVCSWYGIDEKGLQDLIQQYLLINNLVIADRPDD HHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCEEEECCCCC LVVNLHVCRGNYHSKFFASGSYDFIAKPLFEQTNVDGYYLEFDHERSGDFSPLTFISGEK EEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCC TVCLGLVTSKTPTLENKDEVIARIHQAADYLPLERLSLSPQCGFASCEIGNKLTEEEQWA EEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHH KVALVKEISEEVWK HHHHHHHHHHHHCC >Mature Secondary Structure MNTSLKRPLKSHFDVVGSFLRPEHLKKTRESLKEGSISLDQLMQIEDIAIQDLIKKQKAA CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GLSFITDGEFRRATWHYDFMWGFHGVGHHRATEGVFFDGERAMIDDTYLTDKISVSHHPF CCEEEECCCCEEEEEEEEEHHCCCCCCCCCCCCCEEECCCEEEECCCCCCCEEECCCCCH VDHFKFVKALEDEFTTAKQTLPAPAQFLKQMIFPNNIEVTRKFYPTNQELIEDIVAGYRK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH VIRDLYDAGCRYLQLDDCTRGGLVDPRVCSWYGIDEKGLQDLIQQYLLINNLVIADRPDD HHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCEEEECCCCC LVVNLHVCRGNYHSKFFASGSYDFIAKPLFEQTNVDGYYLEFDHERSGDFSPLTFISGEK EEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCC TVCLGLVTSKTPTLENKDEVIARIHQAADYLPLERLSLSPQCGFASCEIGNKLTEEEQWA EEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHH KVALVKEISEEVWK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]