| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835667
GI number: 15835667
Start: 165298
End: 166275
Strand: Direct
Name: Not Available
Synonym: CPj0132
Alternate gene names: NA
Gene position: 165298-166275 (Clockwise)
Preceding gene: 15835666
Following gene: 15835679
Centisome position: 13.48
GC content: 38.45
Gene sequence:
>978_bases ATGATCGAGTTTGCTTTTGTTCCTCATACCTCCGTGACAGCGGATCGGATTGAGGATCGCATGGCCTGTCGCATGAACAA GTTGTCTACTTTAGCAATTACAAGTCTTTGTGTATTGATCAGTTCAGTTTGTATTATGATTGGGATTTTATGCATTTCTG GAACGGTTGGGACCTATGCATTTGTTGTAGGAATTATTTTTTCTGTGCTTGCTTTGGTAGCATGTGTTTTCTTTCTTTAT TTCTTTTATTTTTCTTCTGAGGAATTTAAGTGTGCTTCTTCGCAGGAGTTTCGTTTTTTGCCTATACCAGCTGTGGTTTC TGCATTGCGTTCCTATGAATACATTTCTCAGGACGCTATCAATGACGTTATAAAAGATACGATGCAGTTGTCTACCCTTT CTTCTCTTTTAGATCCCGAAGCTTTTTTCTTAGAATTTCCTTATTTTAACTCTTTGATAGTGAATCATTCGATGAAGGAA GCGGATCGTTTGTCTCGAGAGGCTTTTTTGATTTTATTAGGTGAGATTACTTGGAAGGATTGTGAAACAAAAATTTTGCC ATGGTTGAAAGATCCTAATATCACTCCTGATGATTTCTGGAAGCTATTAAAAGACCATTTCGATTTAAAGGACTTTAAGA AGAGGATCGCCACTTGGATACGGAAGGCCTATCCAGAAATTAGATTACCGAAGAAGCATTGTTTAGATAAGTCTATCTAT AAGGGGTGTTGTAAGTTTTTATTACTTGCTGAGAATGATGTGCAATATCAGAGGTTATTACATAAGGTCTGTTATTTCTC TGGGGAGTTTCCTGCCATGGTTTTAGGTTTGGGAAGTGAAGTGCCTATGGTGTTAGGACTCCCTAAGGTTCCCAAGGATC TTACCTGGGAGATGTTTATGGAAAATATGCCTGTTCTTCTGCAAAGCAAAAGAGAGGGGCATTGGAAAATCTCCTTGGAA GACGTAGCCTCTCTTTAA
Upstream 100 bases:
>100_bases GGAATGGGGTGAGTTTATTTCGGCATGTGAGAAGGCTCTTTTAAAGAATCCGCAAGGAATTTCCATTAAGGATCTAAAAC AATTTTTAGTGAGGTAATCT
Downstream 100 bases:
>100_bases TGAAAGAAGAGTCCTCGGATGAAGCCTATGATTTCTTCTGTAGGTGTTCCAGGGGTATTGATATCGTTAAGACGGTCTTG GAATTGTGGATACGATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE DVASL
Sequences:
>Translated_325_residues MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE DVASL >Mature_325_residues MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE DVASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y132_CHLPN (Q9Z949)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: D86507 - PIR: E72116 - PIR: H81553 - RefSeq: NP_224340.1 - RefSeq: NP_300191.1 - RefSeq: NP_445182.1 - RefSeq: NP_876409.1 - GeneID: 1466816 - GeneID: 894834 - GeneID: 918918 - GeneID: 963245 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0640 - KEGG: cpj:CPj0132 - KEGG: cpn:CPn0132 - KEGG: cpt:CpB0133 - TIGR: CP_0640 - OMA: KRIATWI - ProtClustDB: CLSK337289 - BioCyc: CPNE115711:CP_0640-MONOMER - BioCyc: CPNE115713:CPN0132-MONOMER - BioCyc: CPNE138677:CPJ0132-MONOMER - BioCyc: CPNE182082:CPB0133-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37293; Mature: 37293
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xaeb6588)-; HASH(0xba53e10)-; HASH(0xbc6d1a0)-;
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYA CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FVVGIIFSVLALVACVFFLYFFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH NDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKEADRLSREAFLILLGEITWKD HHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCC CETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFM HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEECCCCCCCHHHHHHHH ENMPVLLQSKREGHWKISLEDVASL CCCCHHHHCCCCCCEEEEHHHHHCH >Mature Secondary Structure MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYA CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FVVGIIFSVLALVACVFFLYFFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH NDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKEADRLSREAFLILLGEITWKD HHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCC CETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFM HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEECCCCCCCHHHHHHHH ENMPVLLQSKREGHWKISLEDVASL CCCCHHHHCCCCCCEEEEHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362