| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835647
GI number: 15835647
Start: 143642
End: 144397
Strand: Reverse
Name: Not Available
Synonym: CPj0111
Alternate gene names: NA
Gene position: 144397-143642 (Counterclockwise)
Preceding gene: 15835659
Following gene: 15835646
Centisome position: 11.77
GC content: 41.67
Gene sequence:
>756_bases ATGAAAAAGCAAGGAAAAACACTCTTCTTATTCCTCTTTCTATCTTTCCTCTTCTCGACGGCTTTTTCTGGTCTTTTTGC CTCTCAAACTAGTTCTTTACGAACAATTCAAGAAAATATTTTTCTTGCTAAGACTGGAGACTATACTGTTTTAAGTCGAG GGTCTCAAAGAACGTTTGTTTTAGTCAAATCAACAACCCCTAAAACCGTTTGGATAGAGATCATCCATTTTCCCTGTATC GCCCATAAAGAACGCCCTTCTTTAGAACAAGCTTCTTGGAAAACGGTCATTCATCAACTGGAATCACCTTCACAAGTCTT TGTTGTTTCGCTCTCTTCTGAAGGTTCTCAGTTTTTCTCTTTAAACACTCGAACCAAGAGCCTAGAGCCTGTAGGAAAAT CCACTACAGTTCCTGCCTTCTTGCAAATCTTTGATCTTCCTTTATCTCCAGCTCCCGCAAACGTAATCAAGACTAAAGGA AAAGAAAACAAGCCCTGGTCTCCCAAAGTTTCTTTTGAAGGGGCTCCACTCACGTCAATCTCTGTGAATGCATGGCAGGG GCTCTGGCCTAAAGATCGAGGCCCCTTATCAGAAACAGGAATCCTTATGTATTTCACCCAACCTGACATTTCTGTGTTTC CTTTATGGGTGAGTATCGAGACTCCTAAAGGGACTTCTATAGTAAGAGCTGTGGATATAGGACACGGGGCAACTTCTCCC TATGTCTATTCTCTTCCTGACTCTAAGACACAATGA
Upstream 100 bases:
>100_bases GGGTGGGTATTTTTTTTCATATTGACAACTCCAAAATCGCTATCCTATTATGCCAAATGATAGCTCGACATACTTCGAGA GGATTCTACAGAAATATCTT
Downstream 100 bases:
>100_bases AAAGATCTAACAATATAGCAAAATAATTTTGGATCGAAAAATCTAATACGCTAGAATGTACTTACGAATTTAGCTCGAGG ATTGTTTTGATTTTTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKKQGKTLFLFLFLSFLFSTAFSGLFASQTSSLRTIQENIFLAKTGDYTVLSRGSQRTFVLVKSTTPKTVWIEIIHFPCI AHKERPSLEQASWKTVIHQLESPSQVFVVSLSSEGSQFFSLNTRTKSLEPVGKSTTVPAFLQIFDLPLSPAPANVIKTKG KENKPWSPKVSFEGAPLTSISVNAWQGLWPKDRGPLSETGILMYFTQPDISVFPLWVSIETPKGTSIVRAVDIGHGATSP YVYSLPDSKTQ
Sequences:
>Translated_251_residues MKKQGKTLFLFLFLSFLFSTAFSGLFASQTSSLRTIQENIFLAKTGDYTVLSRGSQRTFVLVKSTTPKTVWIEIIHFPCI AHKERPSLEQASWKTVIHQLESPSQVFVVSLSSEGSQFFSLNTRTKSLEPVGKSTTVPAFLQIFDLPLSPAPANVIKTKG KENKPWSPKVSFEGAPLTSISVNAWQGLWPKDRGPLSETGILMYFTQPDISVFPLWVSIETPKGTSIVRAVDIGHGATSP YVYSLPDSKTQ >Mature_251_residues MKKQGKTLFLFLFLSFLFSTAFSGLFASQTSSLRTIQENIFLAKTGDYTVLSRGSQRTFVLVKSTTPKTVWIEIIHFPCI AHKERPSLEQASWKTVIHQLESPSQVFVVSLSSEGSQFFSLNTRTKSLEPVGKSTTVPAFLQIFDLPLSPAPANVIKTKG KENKPWSPKVSFEGAPLTSISVNAWQGLWPKDRGPLSETGILMYFTQPDISVFPLWVSIETPKGTSIVRAVDIGHGATSP YVYSLPDSKTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27777; Mature: 27777
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQGKTLFLFLFLSFLFSTAFSGLFASQTSSLRTIQENIFLAKTGDYTVLSRGSQRTFV CCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCEEEEECCCCEEEE LVKSTTPKTVWIEIIHFPCIAHKERPSLEQASWKTVIHQLESPSQVFVVSLSSEGSQFFS EEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE LNTRTKSLEPVGKSTTVPAFLQIFDLPLSPAPANVIKTKGKENKPWSPKVSFEGAPLTSI ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEECCCCCCCCCCCCEEECCCCCEEE SVNAWQGLWPKDRGPLSETGILMYFTQPDISVFPLWVSIETPKGTSIVRAVDIGHGATSP EECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCC YVYSLPDSKTQ EEEECCCCCCC >Mature Secondary Structure MKKQGKTLFLFLFLSFLFSTAFSGLFASQTSSLRTIQENIFLAKTGDYTVLSRGSQRTFV CCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCEEEEECCCCEEEE LVKSTTPKTVWIEIIHFPCIAHKERPSLEQASWKTVIHQLESPSQVFVVSLSSEGSQFFS EEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE LNTRTKSLEPVGKSTTVPAFLQIFDLPLSPAPANVIKTKGKENKPWSPKVSFEGAPLTSI ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEECCCCCCCCCCCCEEECCCCCEEE SVNAWQGLWPKDRGPLSETGILMYFTQPDISVFPLWVSIETPKGTSIVRAVDIGHGATSP EECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCC YVYSLPDSKTQ EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA