| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835640
GI number: 15835640
Start: 132384
End: 133586
Strand: Reverse
Name: Not Available
Synonym: CPj0104
Alternate gene names: NA
Gene position: 133586-132384 (Counterclockwise)
Preceding gene: 15835641
Following gene: 15835637
Centisome position: 10.89
GC content: 40.65
Gene sequence:
>1203_bases ATGAGAATGCTCCAGATTTCTATGCTTCTTTTAGCTTTAGGAACTGCAATCAACTCACCAGCAATCTATGCTGCCGATTC CCAATCCGTATCCTTTCCAGAACAACTTCCCTCTTCATTTACTGGAGAAATTAAGGGAAACCACGTACGGATGCGTCTAG CACCTCATACTGATGGGACCATCATTAGGGAATTTTCTAAAGGAGATCTTGTTGCTGTTATCGGAGAAAGCAAAGACTAC TACGTAATTTCTGCGCCTCCAGGAATTACAGGTTATGTGTTCCGCTCATTTGTTTTAGATAATGTCGTTGAAGGTGAACA AGTCAATGTTCGTTTAGAACCCTCAACATCAGCTCCAGTACTTGTGAGACTCTCCCGAGGCACACAAATACAGCCAGCTT CTCAAGAGCCACATGGGAAATGGTTAGAGGTGGTCTTGCCCTCACAATGCGTATTCTATGTTGCAAAAAACTTTGTTGCT AACAAAGGACCCATCGAGCTGTATACGCAACGCGAGGGACAAAAAAAGATTGCCATGGACCTTATCAATTCTGCTTTAAA CTTTGCTCATATAGAGCTTGAGAAAAGCCTCAATGAGATTGATCTGGAAGCAATTTATAAAAAGATCAACCTTGTACAAT CCGAAGAGTTTAAAGATGTTCCAGGAATTCAAGGGCTTATACAAAAAGCTTTAGAAGAAATCCAAGATGCCTATCTTTCT AAATCTCTAGAATCTCAAAATACTTCGATTGCAAGCTCACAATGTTCCACTCCTAAGGTTTCTTCTTCTGAAGTTACAAC TTCATTACTTTCACGTCATATTCGTAAGCAAACTGCATTAAAAACAGCTCCTCTTACCCAAGGAAGAGAAAACCTAGAGT ATTCTCTCTTCAGAATCTGGGCCAGTATGCAGCAAGGCAATGACCACTCTGAAGCACTAACACAAGAAGCGTTTTATCGC GCTGAACAGAAGAAAAAACAAGTGCTTGCGGGTGTATTAGAAGTGTATCCTCATGTAGTAAAGAACAATCCCGGGGATTA CCTACTAAAAGCTCAGGAAAACACGATTGCTTTTCTTTACGGTACAAGTATCAACTTAGAGCAATGGTTAGGAAAGCGTG TCACTGTGGAATGTCTCCCACGTCCTAACAACCATTTTGCTTTTCCTGCTTATTATGTAGTTGGAATTAAAGAAGCTTCA TAA
Upstream 100 bases:
>100_bases TGAAGTCAATATAATTCTTTTTCTAGGGGTTAATCTCCTTTTTGCTGTAAGCGATGTTTTCAACCAACGGTTAGACGAAA TATATTTGTAGGAGAAAAGC
Downstream 100 bases:
>100_bases CGAAGTATAATGATAGCTTCCAAAGGATTCCAATGGAAGCTCTTCATTTTCTAGATCCTCTGTTCTTCGATTCATTCTTG GATCTATACGCAATCACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGTIIREFSKGDLVAVIGESKDY YVISAPPGITGYVFRSFVLDNVVEGEQVNVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFVA NKGPIELYTQREGQKKIAMDLINSALNFAHIELEKSLNEIDLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLS KSLESQNTSIASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIWASMQQGNDHSEALTQEAFYR AEQKKKQVLAGVLEVYPHVVKNNPGDYLLKAQENTIAFLYGTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS
Sequences:
>Translated_400_residues MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGTIIREFSKGDLVAVIGESKDY YVISAPPGITGYVFRSFVLDNVVEGEQVNVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFVA NKGPIELYTQREGQKKIAMDLINSALNFAHIELEKSLNEIDLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLS KSLESQNTSIASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIWASMQQGNDHSEALTQEAFYR AEQKKKQVLAGVLEVYPHVVKNNPGDYLLKAQENTIAFLYGTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS >Mature_400_residues MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGTIIREFSKGDLVAVIGESKDY YVISAPPGITGYVFRSFVLDNVVEGEQVNVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFVA NKGPIELYTQREGQKKIAMDLINSALNFAHIELEKSLNEIDLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLS KSLESQNTSIASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIWASMQQGNDHSEALTQEAFYR AEQKKKQVLAGVLEVYPHVVKNNPGDYLLKAQENTIAFLYGTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44492; Mature: 44492
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGT CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCC IIREFSKGDLVAVIGESKDYYVISAPPGITGYVFRSFVLDNVVEGEQVNVRLEPSTSAPV EEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCE LVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFVANKGPIELYTQREGQKKIAMD EEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH LINSALNFAHIELEKSLNEIDLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLS HHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSLESQNTSIASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIW HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ASMQQGNDHSEALTQEAFYRAEQKKKQVLAGVLEVYPHVVKNNPGDYLLKAQENTIAFLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE GTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS ECCCCHHHHCCCCEEEEEECCCCCCEECCEEEEEEEEECC >Mature Secondary Structure MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGT CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCC IIREFSKGDLVAVIGESKDYYVISAPPGITGYVFRSFVLDNVVEGEQVNVRLEPSTSAPV EEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCE LVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFVANKGPIELYTQREGQKKIAMD EEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH LINSALNFAHIELEKSLNEIDLEAIYKKINLVQSEEFKDVPGIQGLIQKALEEIQDAYLS HHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSLESQNTSIASSQCSTPKVSSSEVTTSLLSRHIRKQTALKTAPLTQGRENLEYSLFRIW HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ASMQQGNDHSEALTQEAFYRAEQKKKQVLAGVLEVYPHVVKNNPGDYLLKAQENTIAFLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE GTSINLEQWLGKRVTVECLPRPNNHFAFPAYYVVGIKEAS ECCCCHHHHCCCCEEEEEECCCCCCEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA