| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is pyk
Identifier: 15835632
GI number: 15835632
Start: 124226
End: 125680
Strand: Direct
Name: pyk
Synonym: CPj0097
Alternate gene names: 15835632
Gene position: 124226-125680 (Clockwise)
Preceding gene: 161353805
Following gene: 15835635
Centisome position: 10.13
GC content: 42.54
Gene sequence:
>1455_bases ATGATCACACGCACTAAAATTATTTGCACTATAGGGCCAGCAACGAATAGTCCAGAGATGTTAGCAAAACTTCTAGATGC TGGGATGAACGTAGCAAGATTAAATTTCAGTCATGGGAGTCACGAAACTCATGGACAGGCTATTGGATTTCTCAAGGAGT TAAGGGAGCAGAAGCGGGTTCCTTTAGCAATTATGCTAGATACTAAGGGGCCTGAAATTCGTTTAGGGAATATTCCTCAG CCAATTTCGGTTTCTCAGGGACAAAAGCTTCGTCTGGTAAGTAGTGATATCGATGGGAGTGCTGAAGGGGGAGTGTCTCT CTATCCTAAGGGGATATTTCCCTTTGTTCCTGAGGGTGCTGATGTTTTAATAGATGATGGCTACATTCATGCTGTTGTTG TCTCTTCAGAGGCTGATTCTTTAGAATTAGAGTTTATGAACAGTGGCCTTCTCAAGTCTCATAAATCTTTGAGTATCCGA GGTGTTGATGTTGCTCTTCCCTTTATGACAGAGAAAGATATTGCGGATCTTAAGTTTGGGGTAGAGCAGAATATGGATGT GAATGCTGCATCTTTTGTGCGCTACGGTGAAGATATTGAAACTATGCGCAAGTGTTTAGCAGACTTAGGCAATCCTAAGA TGCCCATCATTGCAAAAATAGAAAATCGTTTAGGGGTAGAAAATTTCTCTAAGATTGCCAAGCTTGCGGATGGAATTATG ATTGCTAGAGGAGATTTAGGAATCGAGCTTTCTGTCGTTGAAGTCCCAAATTTGCAAAAGATGATGGCTAAGGTTTCTAG AGAAACAGGTCACTTCTGTGTGACTGCAACGCAGATGCTAGAATCTATGATTCGCAATGTCTTACCTACACGAGCTGAAG TCTCTGATATTGCCAATGCAATTTATGATGGTTCTTCAGCAGTGATGTTGTCAGGGGAAACTGCATCTGGAGCCCATCCC GTGGCTGCCGTGAAAATCATGCGTTCTGTGATTTTAGAAACAGAAAAGAATCTCTCCCATGATTCATTCTTAAAATTAGA CGATAGCAATAGCGCTCTTCAGGTGTCCCCCTATCTCTCAGCCATTGGATTGGCAGGCATTCAGATTGCAGAAAGGGCAG ACGCCAAAGCTCTTATTGTTTATACAGAATCAGGAAGTTCTCCGATGTTTCTCTCTAAATATCGTCCGAAATTCCCTATC ATTGCCGTGACTCCAAGCACTTCTGTTTACTATCGCCTAGCTTTGGAATGGGGGGTCTATCCTATGCTTACCCAGGAAAG TGATCGCGCTGTATGGAGACATCAGGCCTGTATTTATGGCATAGAACAGGGCATTCTCTCTAATTATGATCGGATTCTTG TGCTTAGCAGAGGAGCCTGTATGGAAGAAACAAATAATCTTACCCTGACAATAGTGAATGATATTTTGACTGGGTCGGAA TTTCCTGAAACCTAG
Upstream 100 bases:
>100_bases GTTTGAGTTAATAAAGAGAATTTTTTAATATTTTTTCAAAAAAGAATATAAAATATTTCATTATACCATGAGTTTTTCAT TGAATAGACAATAGGACAGT
Downstream 100 bases:
>100_bases AATTTTTGCTTTAAAATCCAGGACTTCGCAAATTTTTCGAGAATATACAGATGTTTTCGTAAATATGAATTAGGGCTTTT ACTCCACTGTAAGTCAGGGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MITRTKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRVPLAIMLDTKGPEIRLGNIPQ PISVSQGQKLRLVSSDIDGSAEGGVSLYPKGIFPFVPEGADVLIDDGYIHAVVVSSEADSLELEFMNSGLLKSHKSLSIR GVDVALPFMTEKDIADLKFGVEQNMDVNAASFVRYGEDIETMRKCLADLGNPKMPIIAKIENRLGVENFSKIAKLADGIM IARGDLGIELSVVEVPNLQKMMAKVSRETGHFCVTATQMLESMIRNVLPTRAEVSDIANAIYDGSSAVMLSGETASGAHP VAAVKIMRSVILETEKNLSHDSFLKLDDSNSALQVSPYLSAIGLAGIQIAERADAKALIVYTESGSSPMFLSKYRPKFPI IAVTPSTSVYYRLALEWGVYPMLTQESDRAVWRHQACIYGIEQGILSNYDRILVLSRGACMEETNNLTLTIVNDILTGSE FPET
Sequences:
>Translated_484_residues MITRTKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRVPLAIMLDTKGPEIRLGNIPQ PISVSQGQKLRLVSSDIDGSAEGGVSLYPKGIFPFVPEGADVLIDDGYIHAVVVSSEADSLELEFMNSGLLKSHKSLSIR GVDVALPFMTEKDIADLKFGVEQNMDVNAASFVRYGEDIETMRKCLADLGNPKMPIIAKIENRLGVENFSKIAKLADGIM IARGDLGIELSVVEVPNLQKMMAKVSRETGHFCVTATQMLESMIRNVLPTRAEVSDIANAIYDGSSAVMLSGETASGAHP VAAVKIMRSVILETEKNLSHDSFLKLDDSNSALQVSPYLSAIGLAGIQIAERADAKALIVYTESGSSPMFLSKYRPKFPI IAVTPSTSVYYRLALEWGVYPMLTQESDRAVWRHQACIYGIEQGILSNYDRILVLSRGACMEETNNLTLTIVNDILTGSE FPET >Mature_484_residues MITRTKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRVPLAIMLDTKGPEIRLGNIPQ PISVSQGQKLRLVSSDIDGSAEGGVSLYPKGIFPFVPEGADVLIDDGYIHAVVVSSEADSLELEFMNSGLLKSHKSLSIR GVDVALPFMTEKDIADLKFGVEQNMDVNAASFVRYGEDIETMRKCLADLGNPKMPIIAKIENRLGVENFSKIAKLADGIM IARGDLGIELSVVEVPNLQKMMAKVSRETGHFCVTATQMLESMIRNVLPTRAEVSDIANAIYDGSSAVMLSGETASGAHP VAAVKIMRSVILETEKNLSHDSFLKLDDSNSALQVSPYLSAIGLAGIQIAERADAKALIVYTESGSSPMFLSKYRPKFPI IAVTPSTSVYYRLALEWGVYPMLTQESDRAVWRHQACIYGIEQGILSNYDRILVLSRGACMEETNNLTLTIVNDILTGSE FPET
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=466, Percent_Identity=41.4163090128755, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI10835121, Length=466, Percent_Identity=41.4163090128755, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI33286422, Length=471, Percent_Identity=39.0658174097665, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI33286420, Length=471, Percent_Identity=39.0658174097665, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI33286418, Length=471, Percent_Identity=38.6411889596603, Blast_Score=298, Evalue=8e-81, Organism=Homo sapiens, GI310128732, Length=286, Percent_Identity=41.958041958042, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128730, Length=286, Percent_Identity=41.958041958042, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128736, Length=234, Percent_Identity=41.8803418803419, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI310128734, Length=234, Percent_Identity=41.8803418803419, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=40, Blast_Score=136, Evalue=4e-32, Organism=Escherichia coli, GI1787965, Length=428, Percent_Identity=42.0560747663551, Blast_Score=317, Evalue=9e-88, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=33.195020746888, Blast_Score=216, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17544584, Length=435, Percent_Identity=39.5402298850575, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71984413, Length=472, Percent_Identity=38.9830508474576, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17506829, Length=472, Percent_Identity=38.9830508474576, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI71984406, Length=472, Percent_Identity=38.9830508474576, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17506831, Length=472, Percent_Identity=38.9830508474576, Blast_Score=275, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6319279, Length=463, Percent_Identity=39.0928725701944, Blast_Score=282, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6324923, Length=497, Percent_Identity=37.2233400402414, Blast_Score=270, Evalue=4e-73, Organism=Drosophila melanogaster, GI24648964, Length=470, Percent_Identity=39.1489361702128, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI28571814, Length=470, Percent_Identity=39.1489361702128, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI24648966, Length=414, Percent_Identity=39.3719806763285, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24581235, Length=429, Percent_Identity=31.7016317016317, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24646914, Length=268, Percent_Identity=35.0746268656716, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52681; Mature: 52681
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRTKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRV CCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC PLAIMLDTKGPEIRLGNIPQPISVSQGQKLRLVSSDIDGSAEGGVSLYPKGIFPFVPEGA CEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCC DVLIDDGYIHAVVVSSEADSLELEFMNSGLLKSHKSLSIRGVDVALPFMTEKDIADLKFG EEEEECCEEEEEEEECCCCCEEEEECCCCHHHCCCCEEEEEEEEEECCCCCCCHHHHHCC VEQNMDVNAASFVRYGEDIETMRKCLADLGNPKMPIIAKIENRLGVENFSKIAKLADGIM CCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHCCEE IARGDLGIELSVVEVPNLQKMMAKVSRETGHFCVTATQMLESMIRNVLPTRAEVSDIANA EEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHH IYDGSSAVMLSGETASGAHPVAAVKIMRSVILETEKNLSHDSFLKLDDSNSALQVSPYLS HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHH AIGLAGIQIAERADAKALIVYTESGSSPMFLSKYRPKFPIIAVTPSTSVYYRLALEWGVY HHHHCCEEEHHCCCCCEEEEEECCCCCCEEECCCCCCCCEEEECCCCCEEEEEEEECCCC PMLTQESDRAVWRHQACIYGIEQGILSNYDRILVLSRGACMEETNNLTLTIVNDILTGSE EEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEHHHCCCC FPET CCCC >Mature Secondary Structure MITRTKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRV CCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC PLAIMLDTKGPEIRLGNIPQPISVSQGQKLRLVSSDIDGSAEGGVSLYPKGIFPFVPEGA CEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCC DVLIDDGYIHAVVVSSEADSLELEFMNSGLLKSHKSLSIRGVDVALPFMTEKDIADLKFG EEEEECCEEEEEEEECCCCCEEEEECCCCHHHCCCCEEEEEEEEEECCCCCCCHHHHHCC VEQNMDVNAASFVRYGEDIETMRKCLADLGNPKMPIIAKIENRLGVENFSKIAKLADGIM CCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHCCEE IARGDLGIELSVVEVPNLQKMMAKVSRETGHFCVTATQMLESMIRNVLPTRAEVSDIANA EEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHH IYDGSSAVMLSGETASGAHPVAAVKIMRSVILETEKNLSHDSFLKLDDSNSALQVSPYLS HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECHHHH AIGLAGIQIAERADAKALIVYTESGSSPMFLSKYRPKFPIIAVTPSTSVYYRLALEWGVY HHHHCCEEEHHCCCCCEEEEEECCCCCCEEECCCCCCCCEEEECCCCCEEEEEEEECCCC PMLTQESDRAVWRHQACIYGIEQGILSNYDRILVLSRGACMEETNNLTLTIVNDILTGSE EEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEHHHCCCC FPET CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]