| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835580
GI number: 15835580
Start: 58118
End: 60046
Strand: Direct
Name: Not Available
Synonym: CPj0043
Alternate gene names: NA
Gene position: 58118-60046 (Clockwise)
Preceding gene: 15835579
Following gene: 15835581
Centisome position: 4.74
GC content: 43.23
Gene sequence:
>1929_bases ATGCAAGTACCTCTATCACCACAGCTACCCCCCCCCCCCCCAGACCACTCTGTAGGGGCTTCTTTTTGTCTGTCTAAATT TCGTGTTTTAGCAATCACTTTTTTAGTTCTTGGTGTGCTCTTACTGATTTCAGGAGCTCTCTTTCTAACGTTAGGGATTT CAGGAGTCTCTCTTGGAGTTGGTTTGGGGCTCTCTGCATTAGGAAGTGTACTCGTTATTTCGGGATTTCTATTGCTTTTA GAAAGACGAGAGGTTTCGGGAGTGGGTTTAGAGGGGATTCCGACAGGTATTCCTGTGGGTCCTTCTGCAGAACCTTCTTC AGAGGAAATACAGAAGAAGCAAAAAGCAAAGCAAATTTTAGATCAACTGCCTCAGGAACTAGATCAGTTAGATACGGATA TCCAGCACGTGCTCTCATGTTTAGGGAAACTGAAAGATCTTAAGTGCAAAGATCGAGGTCTTTTAAAAGATGCCAAGGAG AAACTGCAAGTTTTTGACTTTGTTTGGAAAGACATGATGATGGAGTTTGTAGAGCTACAGCAGGTCATGGATCAAGAGAG CCGGTATCTAGAGGGCCTGATCCATGAGGTACAAAGTATAGCACACAAACTTTTTGTAGATGATGTAAATATTAGATCCC ATTTAGGGGAGTCGTGCGGGTATTTACCTTCCGAGGATGTTCGAGGGGAACTGTTAAAGAGATTCGCTAAAGAGGTCGTA GCTCGCTTTATGAAAGTGACTCGCGACATACGGAAGATAGCAATGGCTTTTAACAAAAATGCCTATGGGGCAGCAAAAAA TGCCTTTGATAAGGCTTTTGGAAGCTTGGAAACGTGTCTGTATAAGAGTCTGACTAAGAGTTATAGAGATACCTTTTGTG ACTATAAGAGAGCAAAGATCCTTCCGGATGAGAATAATAGCGCTCGTGCCGAGCAAAGGTTTAGGGAAGTCAAGGATCAT TGGGAGGACTTAAACGAAACGGTCTTTTGGGTAAAAGAAGACGGTCGTATTGACATAGAAGTGCTCACTGCAGTCGGTGG GTGGCCAGATCGTTATCCAGAGCATCTTATTCTTGAAAAAAGAAAGGATAAGGTAATGAGCCATCAGTTGTGGGAGGCGA CTATGCGTGTGAAAGAAGCTGAAGTAACGTATAGTGTAGCAAGAGTCGCCTTTGAAAAGGATGGATCTCAGCAGAATCAG AAGAAATTCCAAGAAAAGACAAAAGAGAGGCTGCGATGTTTAAAGGATTTGCGTGATCAGGAGTGTCATCGTGCACAAGA GAGATTAGAAAAACTGACGGCTTTGTATCCTGAGGTTTCAGTCTCTGTAGTAGAGACGGAGAGAGAGAGGAAATTTAATT TAGAGAAAGCCTATGGGAATCTCGAAGAGCGCTATCAGAGCGTTGTGCAAGATCAAGAGGACTACTGGACAGAACAAAAG AACAGGGAAGCAGAATTTAGGGCGAAAGGAACTAAGGTTCGCTCTATGGAGGAGGTGGCAGAGCATCTTCAGATCTTAGA AAATCTATTGGAAGACTGTTATAAGAGATTATCAAAAGCAGAAACTTTTGCCTTAGGGGTGGAGAGGGAAGCTACAGAAG AGATAGAGTATACCATACTCTCTGATGCAGCGAACCGTCTTAAGGTTTTATGTGAAGATATTGAGGACACCCTGCCTCGA GTCGAAGAAATAGAGATGATGCTGCGTATGGCAGAGCGTCCACTCCATCCTATAAAGCAAGCATTTACCAAGGCTTTTGT ACAATATAACAGGTGCAAAGAGAGGTTAGCAAAGGTAGAGCCCTATTATAAAGAGAGCCCTGCATATGTAAATAGCGAAG AGCGATTGCAGAGTTTGGATCAGGCTTCACAGTGCATACAAAGAGTCCCAAAAGGTTTCAAGTTTAGAAACGGAAGCATG TACATATAG
Upstream 100 bases:
>100_bases TAGGCCCTGTTTTTTTAAATTCTTTGAATAAAATACTATATATTAGTGGCTGAGTTAGTTTAACTTATGTGTTTGATTCC GATAGCACCACAGATTCATA
Downstream 100 bases:
>100_bases AGAGTATCTTAGAGAACAAGTACAACAGTTTGAAACTCAAGGAGTGAGCTTGATAAAAGAAGAGCTTCTCTTTTTAAGCA GTACTCTCAAAAGTAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLTLGISGVSLGVGLGLSALGSVLVISGFLLLL ERREVSGVGLEGIPTGIPVGPSAEPSSEEIQKKQKAKQILDQLPQELDQLDTDIQHVLSCLGKLKDLKCKDRGLLKDAKE KLQVFDFVWKDMMMEFVELQQVMDQESRYLEGLIHEVQSIAHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVV ARFMKVTRDIRKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKILPDENNSARAEQRFREVKDH WEDLNETVFWVKEDGRIDIEVLTAVGGWPDRYPEHLILEKRKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQ KKFQEKTKERLRCLKDLRDQECHRAQERLEKLTALYPEVSVSVVETERERKFNLEKAYGNLEERYQSVVQDQEDYWTEQK NREAEFRAKGTKVRSMEEVAEHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTILSDAANRLKVLCEDIEDTLPR VEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVEPYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSM YI
Sequences:
>Translated_642_residues MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLTLGISGVSLGVGLGLSALGSVLVISGFLLLL ERREVSGVGLEGIPTGIPVGPSAEPSSEEIQKKQKAKQILDQLPQELDQLDTDIQHVLSCLGKLKDLKCKDRGLLKDAKE KLQVFDFVWKDMMMEFVELQQVMDQESRYLEGLIHEVQSIAHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVV ARFMKVTRDIRKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKILPDENNSARAEQRFREVKDH WEDLNETVFWVKEDGRIDIEVLTAVGGWPDRYPEHLILEKRKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQ KKFQEKTKERLRCLKDLRDQECHRAQERLEKLTALYPEVSVSVVETERERKFNLEKAYGNLEERYQSVVQDQEDYWTEQK NREAEFRAKGTKVRSMEEVAEHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTILSDAANRLKVLCEDIEDTLPR VEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVEPYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSM YI >Mature_642_residues MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLTLGISGVSLGVGLGLSALGSVLVISGFLLLL ERREVSGVGLEGIPTGIPVGPSAEPSSEEIQKKQKAKQILDQLPQELDQLDTDIQHVLSCLGKLKDLKCKDRGLLKDAKE KLQVFDFVWKDMMMEFVELQQVMDQESRYLEGLIHEVQSIAHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVV ARFMKVTRDIRKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKILPDENNSARAEQRFREVKDH WEDLNETVFWVKEDGRIDIEVLTAVGGWPDRYPEHLILEKRKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQ KKFQEKTKERLRCLKDLRDQECHRAQERLEKLTALYPEVSVSVVETERERKFNLEKAYGNLEERYQSVVQDQEDYWTEQK NREAEFRAKGTKVRSMEEVAEHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTILSDAANRLKVLCEDIEDTLPR VEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVEPYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSM YI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73785; Mature: 73785
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLTLGISGVSLGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLSALGSVLVISGFLLLLERREVSGVGLEGIPTGIPVGPSAEPSSEEIQKKQKAKQIL HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DQLPQELDQLDTDIQHVLSCLGKLKDLKCKDRGLLKDAKEKLQVFDFVWKDMMMEFVELQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVMDQESRYLEGLIHEVQSIAHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHH ARFMKVTRDIRKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPDENNSARAEQRFREVKDHWEDLNETVFWVKEDGRIDIEVLTAVGGWPDRYPEHLILEK CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCHHHHHHH RKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQKKFQEKTKERLRCLKDLRDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ECHRAQERLEKLTALYPEVSVSVVETERERKFNLEKAYGNLEERYQSVVQDQEDYWTEQK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCHHHHHHHHC NREAEFRAKGTKVRSMEEVAEHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTIL CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SDAANRLKVLCEDIEDTLPRVEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVE HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC PYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSMYI CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLTLGISGVSLGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLSALGSVLVISGFLLLLERREVSGVGLEGIPTGIPVGPSAEPSSEEIQKKQKAKQIL HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DQLPQELDQLDTDIQHVLSCLGKLKDLKCKDRGLLKDAKEKLQVFDFVWKDMMMEFVELQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVMDQESRYLEGLIHEVQSIAHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHH ARFMKVTRDIRKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPDENNSARAEQRFREVKDHWEDLNETVFWVKEDGRIDIEVLTAVGGWPDRYPEHLILEK CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCHHHHHHH RKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQKKFQEKTKERLRCLKDLRDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ECHRAQERLEKLTALYPEVSVSVVETERERKFNLEKAYGNLEERYQSVVQDQEDYWTEQK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCHHHHHHHHC NREAEFRAKGTKVRSMEEVAEHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTIL CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SDAANRLKVLCEDIEDTLPRVEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVE HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC PYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSMYI CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA