| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835571
GI number: 15835571
Start: 47878
End: 49128
Strand: Reverse
Name: Not Available
Synonym: CPj0034
Alternate gene names: NA
Gene position: 49128-47878 (Counterclockwise)
Preceding gene: 15835572
Following gene: 15835566
Centisome position: 4.01
GC content: 41.49
Gene sequence:
>1251_bases ATGGCGGAAATATCGACTCCATCTTTACCCGACTCCTCTATTGTATCCCAGAAGACACCGCCTGTTCCGGATCCAGATTC TTCTCCTGACCATATCCCTACAATCCCCACGCAGGCACCTTTTAAACCTCAACGCAAGAAAGAAACTCCATCTTCAATAG TCAACGCAATTGCTTTTGCCATTTTAGCATTCCTATCTTGCCTAGGGGGAGTTTTTGCCATTTGCCTAGGGTGTTCCCTA GAGATCACCATGCCTCTATTCATACTTACCGCAGTCTTTATTGCTTTTACGTTGTTGTATTTTATACACTACCTAGAAAA ACCTAAGATTCCTGAGCCACTCCCCACTCCTCCACCCTCACCAACTCTAAGAGCACCCACACTAACTCCAGAAATACCCG CGCCAGCTCCAGGAATACCCTTACCTCCAACTCTACCTAAAGTCGATAGAACAAAACTGACCTGCAATCCTGATATACAT TATCCCTCTACGTATGATCCTAAGGCTTGTTTTTCGTTACTCAAGCAGCTATTCTCTCTAGATCCAGAAACCAGACCCGA AGATCGTAAGTATTCCAACAAGCTAGCAAGTATTCTCCTGAGATCTAAAGAAAAATCTGGATTCCGTTTTCACTGCTTTA AAGGACATTTTTCTCATGATAAAATTCTAAATAAAAAATCAGGGGCTGTTGTTATCTCTTCACATTCTAGCATGGATTTC TCCACAACATTAGGAAGAGCGTTTGCTGTTACAACATGTTTACAAAGGAGCTGCTGGGAAAAGATCAAAAACAACATTCC CACTCCAGAAAAACACTTGCCTATAGGTTCATGCGTTTCTGGCCCTTGGGATGTAGAAGAGGGCGCGCAACTGTACACCT CTCATCTGATTGTTATCAATCCCCCTACATTAGAAACTCTCATTAAGGAAAAAATGCGCCGCGCAATTACATTGAAAGAT TTTAGTATGAAAGAGGCATTTACTAATTTAGTACTGGCTTATTTGCAATGCTTTGATATCTGTATTGAGCACAATCTTGA AAGTGTACAGTTAGAAGTTTTTGGATTAAATAACCTCAGCGCAGATCAAGAGGAATTTACTACATGGGAGAGTTGTTGCC ATCTTGCTCTTTTAGAATCCGTGCGCATTTTATTAGCATCCAAAGAAGAGTACGCACTCTCTAATGTTTCAGTAAATAGC ATCTCCCAAGTACCTCTACAAACAGCGTGTCGGGCTCTCTTTTTGAATTAA
Upstream 100 bases:
>100_bases TATTCTAATGACAAATCAAAATAATCTTTGTTTTTCTGATTTGTTTTTATATTAAAATTAAGTAAATTTTTTATTGCCAA CAACTTGTAGGGGAATTCTT
Downstream 100 bases:
>100_bases AATCCCGGCCTAGAAAGAAGCTGGAGAATCGCCTAGAATTCTGCGAGACTTTTCGCGGCTTGTAAAATAGACTCCTTATG AGGAAGCACTTCGTTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MAEISTPSLPDSSIVSQKTPPVPDPDSSPDHIPTIPTQAPFKPQRKKETPSSIVNAIAFAILAFLSCLGGVFAICLGCSL EITMPLFILTAVFIAFTLLYFIHYLEKPKIPEPLPTPPPSPTLRAPTLTPEIPAPAPGIPLPPTLPKVDRTKLTCNPDIH YPSTYDPKACFSLLKQLFSLDPETRPEDRKYSNKLASILLRSKEKSGFRFHCFKGHFSHDKILNKKSGAVVISSHSSMDF STTLGRAFAVTTCLQRSCWEKIKNNIPTPEKHLPIGSCVSGPWDVEEGAQLYTSHLIVINPPTLETLIKEKMRRAITLKD FSMKEAFTNLVLAYLQCFDICIEHNLESVQLEVFGLNNLSADQEEFTTWESCCHLALLESVRILLASKEEYALSNVSVNS ISQVPLQTACRALFLN
Sequences:
>Translated_416_residues MAEISTPSLPDSSIVSQKTPPVPDPDSSPDHIPTIPTQAPFKPQRKKETPSSIVNAIAFAILAFLSCLGGVFAICLGCSL EITMPLFILTAVFIAFTLLYFIHYLEKPKIPEPLPTPPPSPTLRAPTLTPEIPAPAPGIPLPPTLPKVDRTKLTCNPDIH YPSTYDPKACFSLLKQLFSLDPETRPEDRKYSNKLASILLRSKEKSGFRFHCFKGHFSHDKILNKKSGAVVISSHSSMDF STTLGRAFAVTTCLQRSCWEKIKNNIPTPEKHLPIGSCVSGPWDVEEGAQLYTSHLIVINPPTLETLIKEKMRRAITLKD FSMKEAFTNLVLAYLQCFDICIEHNLESVQLEVFGLNNLSADQEEFTTWESCCHLALLESVRILLASKEEYALSNVSVNS ISQVPLQTACRALFLN >Mature_415_residues AEISTPSLPDSSIVSQKTPPVPDPDSSPDHIPTIPTQAPFKPQRKKETPSSIVNAIAFAILAFLSCLGGVFAICLGCSLE ITMPLFILTAVFIAFTLLYFIHYLEKPKIPEPLPTPPPSPTLRAPTLTPEIPAPAPGIPLPPTLPKVDRTKLTCNPDIHY PSTYDPKACFSLLKQLFSLDPETRPEDRKYSNKLASILLRSKEKSGFRFHCFKGHFSHDKILNKKSGAVVISSHSSMDFS TTLGRAFAVTTCLQRSCWEKIKNNIPTPEKHLPIGSCVSGPWDVEEGAQLYTSHLIVINPPTLETLIKEKMRRAITLKDF SMKEAFTNLVLAYLQCFDICIEHNLESVQLEVFGLNNLSADQEEFTTWESCCHLALLESVRILLASKEEYALSNVSVNSI SQVPLQTACRALFLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46075; Mature: 45944
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEISTPSLPDSSIVSQKTPPVPDPDSSPDHIPTIPTQAPFKPQRKKETPSSIVNAIAFA CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ILAFLSCLGGVFAICLGCSLEITMPLFILTAVFIAFTLLYFIHYLEKPKIPEPLPTPPPS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTLRAPTLTPEIPAPAPGIPLPPTLPKVDRTKLTCNPDIHYPSTYDPKACFSLLKQLFSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC DPETRPEDRKYSNKLASILLRSKEKSGFRFHCFKGHFSHDKILNKKSGAVVISSHSSMDF CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCH STTLGRAFAVTTCLQRSCWEKIKNNIPTPEKHLPIGSCVSGPWDVEEGAQLYTSHLIVIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEC PPTLETLIKEKMRRAITLKDFSMKEAFTNLVLAYLQCFDICIEHNLESVQLEVFGLNNLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC ADQEEFTTWESCCHLALLESVRILLASKEEYALSNVSVNSISQVPLQTACRALFLN CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure AEISTPSLPDSSIVSQKTPPVPDPDSSPDHIPTIPTQAPFKPQRKKETPSSIVNAIAFA CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ILAFLSCLGGVFAICLGCSLEITMPLFILTAVFIAFTLLYFIHYLEKPKIPEPLPTPPPS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTLRAPTLTPEIPAPAPGIPLPPTLPKVDRTKLTCNPDIHYPSTYDPKACFSLLKQLFSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC DPETRPEDRKYSNKLASILLRSKEKSGFRFHCFKGHFSHDKILNKKSGAVVISSHSSMDF CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCH STTLGRAFAVTTCLQRSCWEKIKNNIPTPEKHLPIGSCVSGPWDVEEGAQLYTSHLIVIN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEC PPTLETLIKEKMRRAITLKDFSMKEAFTNLVLAYLQCFDICIEHNLESVQLEVFGLNNLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC ADQEEFTTWESCCHLALLESVRILLASKEEYALSNVSVNSISQVPLQTACRALFLN CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA