| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16753025
GI number: 16753025
Start: 808487
End: 810601
Strand: Direct
Name: Not Available
Synonym: CP0756
Alternate gene names: NA
Gene position: 808487-810601 (Clockwise)
Preceding gene: 16753024
Following gene: 16753041
Centisome position: 65.74
GC content: 43.07
Gene sequence:
>2115_bases TTGTGGAGTAACCCCAACCTACGTCTTATGAAACGTTGCTTCTTATTTCTAGCTTCCTTTGTTCTTATGGGTTCCTCAGC TGATGCTTTGACTCATCAAGAGGCTGTGAAAAAGAAAAACTCCTATCTTAGTCACTTTAAGAGTGTTTCTGGGATTGTGA CCATCGAAGATGGGGTATTGAATATCCATAACAACCTGCGGATACAAGCCAATAAAGTGTATGTAGAAAATACTGTGGGT CAAAGCCTGAAGCTTGTCGCACATGGCAATGTTATGGTGAACTATAGGGCAAAAACCCTAGTTTGTGATTACCTAGAGTA TTACGAAGATACAGACTCTTGTCTTCTTACTAATGGAAGATTCGCGATGTATCCTTGGTTTCTAGGGGGGTCTATGATCA CTCTAACCCCAGAAACCATAGTCATTCGGAAGGGATATATCTCTACCTCCGAGGGTCCCAAAAAAGACCTGTGCCTCTCC GGAGATTACCTGGAATATTCTTCAGATAGTCTTCTTTCTATAGGGAAGACAACATTAAGGGTGTGTCGCATTCCGATACT TTTCTTACCTCCATTTTCTATCATGCCTATGGAGATCCCTAAGCCTCCGATAAACTTTCGAGGAGGAACAGGAGGATTTC TGGGATCCTATTTGGGGATGAGCTACTCGCCGATTTCTAGGAAGCATTTCTCCTCGACATTTTTCTTGGATAGCTTTTTC AAGCATGGCGTCGGCATGGGATTCAACCTCCATTGTTCTCAGAAGCAGGTTCCTGAGAATGTCTTCAATATGAAAAGCTA TTATGCCCACCGCCTTGCTATCGATATGGCAGAAGCTCATGATCGCTATCGCCTACACGGAGATTTCTGCTTCACGCATA AGCATGTAAATTTTTCTGGAGAATACCATCTCAGCGATAGTTGGGAAACTGTTGCTGACATTTTCCCCAACAACTTCATG TTGAAAAATACAGGCCCCACACGTGTCGATTGCACTTGGAATGACAACTATTTTGAAGGGTATCTCACCTCTTCTGTTAA GGTAAACTCTTTCCAAAATGCCAACCAAGAGCTCCCTTATTTAACATTAAGGCAGTACCCGATTTCTATTTATAATACGG GAGTGTACCTTGAAAACATCGTAGAATGTGGGTATTTAAACTTTGCTTTTAGCGATCATATCGTTGGCGAGAATTTCTCT TCACTACGTCTTGCTGCGCGCCCTAAGCTCCATAAAACTGTGCCTCTACCTATAGGAACGCTCTCCTCCACCCTAGGGAG TTCTCTGATTTACTATAGCGATGTTCCTGAGATCTCCTCGCGCCATAGTCAGCTTTCCGCGAAGCTACAACTTGATTATC GCTTTCTATTACATAAGTCCTACATTCAAAGACGCCATATTATAGAGCCGTTCGTTACCTTCATTACAGAGACTCGTCCT CTAGCTAAGAATGAAGATCATTATATCTTTTCCATTCAAGATGCCTTTCACTCCTTAAACCTTCTGAAAGCGGGTATAGA TACCTCGGTACTGAGTAAGACTAACCCTCGATTCCCGAGAATCCATGCGAAGCTGTGGACTACCCACATCTTGAGCAATA CAGAAAGCAAACCCACGTTTCCCAAAACTGCATGCGAGCTATCTCTACCTTTTGGAAAGAAAAATACAGTCTCCTTAGAT GCTGAATGGATTTGGAAAAAGCACTGTTGGGATCACATGAACATACGTTGGGAGTGGATCGGAAATGACAATGTGGCTAT GACTCTAGAATCCCTGCATAGAAGCAAATACAGCCTGATTAAGTGTGACAGGGAGAACTTCATTTTAGATGTCAGCCGTC CCATTGACCAGCTTTTAGACTCCCCTCTCTCTGATCATAGGAATCTCATTTTAGGGAAATTATTTGTACGACCTCATCCC TGTTGGAATTACCGCTTATCCTTACGCTATGGCTGGCATCGCCAGGACACTCCGAACTACCTAGAATACCAGATGATTCT AGGGACGAAGATCTTCGAACATTGGCAGCTCTATGGGGTGTATGAACGCCGAGAAGCAGATAGTCGATTTTTCTTCTTCT TAAAGCTCGACAAACCTAAAAAACCTCCCTTCTAA
Upstream 100 bases:
>100_bases GCCACCTCGAAGTCTTCCGAAGATATCCGTTTATTGATACAACTGATGACGGAAGGAGATGCAAAAAATTTCCCAGTCCT TGCAGGCTTACTCATAAAAA
Downstream 100 bases:
>100_bases CCTCTGACTTAGACATGAGAATGAACCTCCTGTGTCAAGTCATGGATCCCTTACCATAGAGAATGCAATAGATCCAGGTG AGGTCTCGTCAGACATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MWSNPNLRLMKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVG QSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLS GDYLEYSSDSLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFF KHGVGMGFNLHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFM LKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFS SLRLAARPKLHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRP LAKNEDHYIFSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLD AEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHP CWNYRLSLRYGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF
Sequences:
>Translated_704_residues MWSNPNLRLMKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVG QSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLS GDYLEYSSDSLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFF KHGVGMGFNLHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFM LKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFS SLRLAARPKLHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRP LAKNEDHYIFSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLD AEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHP CWNYRLSLRYGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF >Mature_704_residues MWSNPNLRLMKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVLNIHNNLRIQANKVYVENTVG QSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGRFAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLS GDYLEYSSDSLLSIGKTTLRVCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFF KHGVGMGFNLHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSGEYHLSDSWETVADIFPNNFM LKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPYLTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFS SLRLAARPKLHKTVPLPIGTLSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRP LAKNEDHYIFSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTFPKTACELSLPFGKKNTVSLD AEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLIKCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHP CWNYRLSLRYGWHRQDTPNYLEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81367; Mature: 81367
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSNPNLRLMKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVL CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEE NIHNNLRIQANKVYVENTVGQSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGR EECCCEEEEEEEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCEEEECCC FAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSDSLLSIGKTTLR EEEEEEEECCEEEEECCCEEEEEECEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHH VCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFF HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHH KHGVGMGFNLHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSG HHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHEEEHHHCCCCEEEECEEEEEEEEECCCC EYHLSDSWETVADIFPNNFMLKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPY EEEECCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCEEECCCCCCCCCCCE LTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPKLHKTVPLPIGT EEEECCCEEEEECCHHHHHHHHCCEEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCCHH LSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRP HHHHHCCCEEEECCCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LAKNEDHYIFSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTF CCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCC PKTACELSLPFGKKNTVSLDAEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLI CCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHCCCEEEE KCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLRYGWHRQDTPNY EECCCCEEEECCHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCC LEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF EEEEEHHHHHHHHHHHEEEEHHHCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MWSNPNLRLMKRCFLFLASFVLMGSSADALTHQEAVKKKNSYLSHFKSVSGIVTIEDGVL CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEE NIHNNLRIQANKVYVENTVGQSLKLVAHGNVMVNYRAKTLVCDYLEYYEDTDSCLLTNGR EECCCEEEEEEEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCEEEECCC FAMYPWFLGGSMITLTPETIVIRKGYISTSEGPKKDLCLSGDYLEYSSDSLLSIGKTTLR EEEEEEEECCEEEEECCCEEEEEECEECCCCCCCCCEEECCCCEECCCCCHHHHHHHHHH VCRIPILFLPPFSIMPMEIPKPPINFRGGTGGFLGSYLGMSYSPISRKHFSSTFFLDSFF HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHH KHGVGMGFNLHCSQKQVPENVFNMKSYYAHRLAIDMAEAHDRYRLHGDFCFTHKHVNFSG HHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHEEEHHHCCCCEEEECEEEEEEEEECCCC EYHLSDSWETVADIFPNNFMLKNTGPTRVDCTWNDNYFEGYLTSSVKVNSFQNANQELPY EEEECCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEECCEEECCCCCCCCCCCE LTLRQYPISIYNTGVYLENIVECGYLNFAFSDHIVGENFSSLRLAARPKLHKTVPLPIGT EEEECCCEEEEECCHHHHHHHHCCEEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCCHH LSSTLGSSLIYYSDVPEISSRHSQLSAKLQLDYRFLLHKSYIQRRHIIEPFVTFITETRP HHHHHCCCEEEECCCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LAKNEDHYIFSIQDAFHSLNLLKAGIDTSVLSKTNPRFPRIHAKLWTTHILSNTESKPTF CCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCC PKTACELSLPFGKKNTVSLDAEWIWKKHCWDHMNIRWEWIGNDNVAMTLESLHRSKYSLI CCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHCCCEEEE KCDRENFILDVSRPIDQLLDSPLSDHRNLILGKLFVRPHPCWNYRLSLRYGWHRQDTPNY EECCCCEEEECCHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCC LEYQMILGTKIFEHWQLYGVYERREADSRFFFFLKLDKPKKPPF EEEEEHHHHHHHHHHHEEEEHHHCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA