Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752686

GI number: 16752686

Start: 441302

End: 442609

Strand: Direct

Name: Not Available

Synonym: CP0404

Alternate gene names: NA

Gene position: 441302-442609 (Clockwise)

Preceding gene: 16752685

Following gene: 16752693

Centisome position: 35.88

GC content: 38.99

Gene sequence:

>1308_bases
TTGGCTATGAGCATGACGATCGTTCCACATGCTTTATTTAAAAATCATTGCGAGTGTCATTCTACCTTTCCTTTGAGTTC
AAGGACTATTGTAAGAATAGCCATTGCCAGCCTCTTTTGTATAGGTGCATTAGCAGCTTTAGGCTGTTTGGCTCCTCCCG
TTTCTTATATTGTTGGGAGTGTTTTAGCTTTTATTGCCTTTGTCATTCTTTCTTTAGTAATTTTAGCTTTGATTTTTGGA
GAGAAGAAGCTTCCACCAACACCAAGAATCATTCCTGATAGATTTACTCACGTGATAGATGAAGCTTATGGCCTTTCAAT
CTCTGCATTTGTAAGAGAACAGCAGGTAACATTAGCCGAGTTTAGACAATTTTCTACTGCCCTGTTGTGTAACATATCTC
CTGAAGAGAAAATCAAACAATTGCCTTCTGAATTGCGAAGTAAAGTAGAGAGTTTTGGTATTAGCAGGCTCGCAGGTGAT
TTAGAAAAGAATAATTGGCCAATATTTGAAGATCTTTTAAGCCAAACCTGCCCGTTATATTGGCTTCAGAAATTTATATC
AGCAGGAGATCCACAAGTTTGTAGAGACCTACGTGTCCCTAGAGAATGTTATGGGTACTATTGGCTAGGGCCTTTGGGAT
ACAGTACAGCTAAGGCTACAATTTTTTGTAAAGAGACGCATCATATTCTTCAACAATTAACGAAAGAGGACGTTCTTTTA
TTAAAAAACAAGGCTCTTCAAGAGAAATGGGATACTGATGAAGTCAAAGCAATTGTAGAGCGTATCTACACTACCTATAC
GGCACGAGGAACTCTAAAGACCGAAGCAGGGGGACTTACAAAAGAGACAATCAGTAAGGAATTGCTATTGTTGAGCTTGC
ATGGCTATTCTTTTGATCAGCTACAGCTGATCACTCAACTTCCTAGAGATGCTTGGGATTGGCTGTGTTTTGTAGATAAC
AGTACCGCATACAACCTTCAGCTTTGTGCTCTTGTAGGAGCTTTGTCATCCCAAAATCTTCTTGACGAATCTTCTATCGA
TTTTGATGTAAACCTAGGCCTGTATGTGATTCAGGATCTAAAAGAAGCTGTTCAAGCATTTTCTGCTTCTGATGAGCCAA
AGAAAGAACTAGGTAAATTCTTGTTAAGGCATTTGAGTTCAGTTTCTAAGCGATTAGAGAGTGTATTAAGACAGGGTCTT
CACAGAATAGCTCTAGAGCATGGAAATGCCAGAGCTAGGGTTTATGACGTCAATTTTGTAACAGGAGCTAGAATTCATAG
GAAGACGAGTATCTTCTTTAAAGACTAA

Upstream 100 bases:

>100_bases
GCTATTTTTCATGGGATTTTTTATTACAGGAAATTCTTGAATTAGAGATTTTTATTTACACATAATCTATACTGCCTTCA
ATAGATCTATATCTAAGGAG

Downstream 100 bases:

>100_bases
ACCAGGTAACTAGCTTTTTAGTCTCGAAAGGGGCTACGAGAGGGAGTAGAATTTTTCTTATTCCAAAATAGAAATCTCTA
ACCTATCAGCAGGGAGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFG
EKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGD
LEKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL
LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDN
STAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGL
HRIALEHGNARARVYDVNFVTGARIHRKTSIFFKD

Sequences:

>Translated_435_residues
MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFG
EKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGD
LEKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL
LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDN
STAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGL
HRIALEHGNARARVYDVNFVTGARIHRKTSIFFKD
>Mature_434_residues
AMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGE
KKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDL
EKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLL
KNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNS
TAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLH
RIALEHGNARARVYDVNFVTGARIHRKTSIFFKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48920; Mature: 48789

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGS
CCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLAFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLY
HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
WLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL
HHHHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHH
LQLITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDL
HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHH
KEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
TGARIHRKTSIFFKD
CCCHHHHCCEEEECC
>Mature Secondary Structure 
AMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGS
CCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLAFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLY
HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
WLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL
HHHHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHH
LQLITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDL
HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHH
KEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
TGARIHRKTSIFFKD
CCCHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA