| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16752658
GI number: 16752658
Start: 411595
End: 413163
Strand: Direct
Name: Not Available
Synonym: CP0375
Alternate gene names: NA
Gene position: 411595-413163 (Clockwise)
Preceding gene: 16752656
Following gene: 16752661
Centisome position: 33.47
GC content: 44.23
Gene sequence:
>1569_bases GTGGCTTCGGATGTGTATGAGTTGGTTTGCCTTTGTGGCGGTGATGAGGATCCTGAGCCCCCAGATTCTGAGGTACGTAC TCTCTATGTAAATGGAAGTTGGCAAACGCATCAAGAAGCTGTACAGGAATTGCTGTATATTAGTGAAGTACGGGGAGAGG CCGTTCGTCTTCTCTATAACGATGGAAGCGGCATGTCTCCTTGGCCCATCAGTCCTTGTCGTACTCTTCCTACTCTCGAT CATCCTTTATGTCAGGCCCTTTTGACGGTTTGGGAACAGTTTTTCTCTGCTCCTGAAAATCAGAATCGTGAGTTTCTAGT GATTTTCTATGGGGATGCATCGCCTTATATACAACAGGCGTTAACGCAATCTAGGCATAGTCCACGTATTGTTGTTGTAG GGATTTCCCCGACGGTCTTTATTCAAGGAGACTTTAGGGTCCATAATTACCGTGTTTCTGGAGACTTCTTTAGTTCTCTG GATTGTCGGGGAACTAGGGCGGAGAACACCACGATACTGCCGTATTCTTCGGGTCTTGAGGGTGTTTTTCTGCCTTCTAT CCGTTGTCCTTCTTTTACTTGGGCGGTGCGTTTTGGAGAGCAATGCTTGGTTGCGAATAGGGGTGAGGATGTAGAAGATA GGGGAGGTCTTTCTCAAGATGCCGAAAGATCACAGTTACCACACAGTGAAAGAGATCTAGCTGTTGTCATTGATTCTACG GATCCTAGTTCTATGAGTAGGCTTGTAGAATGGTTGAATCAAGGATCGCCTTCATCAGATATGGAAATCAATCCCTATCC CCAACGGTGTCCTGATGTAGCTCTTTCTGCGCTTTATGCAATTTCTAGAGTTTCAGGACTTGCGCAGGAATGGATCCTAG CCTCTGTTCATGAGGGCTTAGACTTGCAGATCTGTTACTCTTTAATTTTGATGCACACGACGTTTGCGGTCCGGTATTTT TTCTTACTCTTTACAAATTATCCTCAGTCTAGAGAGAGATTCCGTACTGCACGAATCGTAGCACAATCTCTATATTTACC AAGCATCCTTGTTCTTGTTTTTGATTGTGGCAACGTCCTGCGTAAACTATGGATGCCTCAGGAAATCTTACGAGCAATTT TTATTTCTGCGTCTACAATTTCAGGGAGTATTGTCTTTGTAGAGTGCACTCGCTGGATGGGGCGAGGTCTTAGACATCGT GTACAACAATTTGTGCAGCAACGAGTTATAGGAAGTGGCCTGCCTGTAGGAACAGTACGAGCTTCTTATCGCGATCGTGC AGGCTTTATCATAGGCTTTTTACAAACTGTACATGGAGGACTTTATTTGCCGGTATCCATTATGGTGCTTAACCAGATTG CAATACAAGTTCCACGTATCTTAGTACGTCCAAATAACACTGCTGTTTATGATCTACATAATAAAAGTGCTGAAGAAAAT TGGAGCAGTGGTGATGTATTAGCTGTTGGCCAAACATTAAACTTCATCTTATGTGCTTTCGTCTTGTTCGTAAATCTATG GTTCTTTGTGAAGTCCGTATTACGCCATTCTAGGCGTCGTCGTCGCTAA
Upstream 100 bases:
>100_bases AATATCTCCTCCTTCTCTAGACGTATCAACAGTTGCATCTTCGGCTGAAGATATCTCGGTCTTCATTGCAGGAGGCCCTA GAAGTTCTTCATCTGCTTCT
Downstream 100 bases:
>100_bases TGTATCTTTGGAGACATCTTGGTATTTTTAACATAAGAGCACGGCAAAAAAAAGAAAGACCGAGAAAGAAGCTTTACCTT TAAGAGTTCTCTGATGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLD HPLCQALLTVWEQFFSAPENQNREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSL DCRGTRAENTTILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDST DPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYF FLLFTNYPQSRERFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHR VQQFVQQRVIGSGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEEN WSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR
Sequences:
>Translated_522_residues MASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLD HPLCQALLTVWEQFFSAPENQNREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSL DCRGTRAENTTILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDST DPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYF FLLFTNYPQSRERFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHR VQQFVQQRVIGSGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEEN WSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR >Mature_521_residues ASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLDH PLCQALLTVWEQFFSAPENQNREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLD CRGTRAENTTILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDSTD PSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYFF LLFTNYPQSRERFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRV QQFVQQRVIGSGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEENW SSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58930; Mature: 58799
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYN CCCHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE DGSGMSPWPISPCRTLPTLDHPLCQALLTVWEQFFSAPENQNREFLVIFYGDASPYIQQA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH LTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTTILPYSSGLE HHHCCCCCEEEEEECCCEEEEEECEEEEEEEECCCHHCCCCCCCCCCCCCEEEEECCCCC GVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDST EEEECCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCHHHHCCCCCCCEEEEEECC DPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGL CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLQICYSLILMHTTFAVRYFFLLFTNYPQSRERFRTARIVAQSLYLPSILVLVFDCGNVL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIGSGLPVGTVR HHHCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEEN HHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCC WSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYN CCHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE DGSGMSPWPISPCRTLPTLDHPLCQALLTVWEQFFSAPENQNREFLVIFYGDASPYIQQA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH LTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTTILPYSSGLE HHHCCCCCEEEEEECCCEEEEEECEEEEEEEECCCHHCCCCCCCCCCCCCEEEEECCCCC GVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDST EEEECCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCHHHHCCCCCCCEEEEEECC DPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGL CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLQICYSLILMHTTFAVRYFFLLFTNYPQSRERFRTARIVAQSLYLPSILVLVFDCGNVL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIGSGLPVGTVR HHHCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEEN HHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCC WSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA