Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752525

GI number: 16752525

Start: 241954

End: 242793

Strand: Direct

Name: Not Available

Synonym: CP0236

Alternate gene names: NA

Gene position: 241954-242793 (Clockwise)

Preceding gene: 16752524

Following gene: 16752526

Centisome position: 19.67

GC content: 45.05

Gene sequence:

>840_bases
ATGTCATCACTACTGAGCTGCGGAAGAATAGAGCCGACTCGGGTTACCTGTAGCTTAAAGACGTATCTTGAGGATACGAG
TCAGAATCAGTTGAGCACACGTCTAGTTCGGGCAAGTGTCATCTTTTTATGCGCATTGTTGATCATTTTGGTTTGTGTGG
CCCTCTCTAGTTTGATTCCAAGCATTATGGCCTTGSCGACCTCTTTTACGGTAATGGGGTTAATTCTTTTTGTGATGTCA
CTTCTTGGTGACGTTGCAATTATAAGTTATCTTACTTATAGCACTGTTACGAGTTACCGGCAAAATAAGAGAGCTTTTGA
GATTCACAAGCCCGCTCGCTCCGTTTACTACGAGGGGGTCCGCCATTGGGATTTAGGACGATCATCTTTAGGCACAGGCG
AGATTCCTATAGTAAGGACGTTATTCTCTCCATTTCAGAACCATGGTCTTAACCATGCCTTAGCTGCTAAAATTTTCCTA
TTTATGGAGCATTTCAGCCCTGAGCCACCGAACGAGCCTTTGGTGGATTGGGCCTGTTTGATTCGGGATTTTAGGCCTCA
CGTCAGTTCTTTGTGCTTTGTTATTGAAAAACAAGGGTCATCGCTGAGGACTAAGGAAGGCAATACGATTTGTGAGGCTT
TCCGCTCTGATTACGACGCCCATTTTGCTATGGTAGATTGCTACCGGTTGATCCACTCTAAGTTGATTATAGAGAAAATG
GGATTGAAGAATATCGATATCATTCCGAGTGTCATGGTTCGTGAAGATTATCCTAGCCGTCCTGGGGAGGGCTATCGCGA
AGGCCTATTACGTATGTATGGTGGCAAGGGGGCTCTGTGA

Upstream 100 bases:

>100_bases
GTTAAAATTTTAACAATAGCTATTTATTATTAGTCATTTTTTTAATTAAAAAACTGTTAAAATTTTTAAAGCTAATTTAA
GAAACAGTGAATAGTTCATC

Downstream 100 bases:

>100_bases
CTTCCCTACTTTAGTTCCTAATGAGCGCTTGCCTATAGGGCCTTTCTTTGTCCCGCAGCACACTTCCGGTGCGAAGGGTA
AGGAGTTTGCTAAAAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALXTSFTVMGLILFVMS
LLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFL
FMEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM
GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL

Sequences:

>Translated_279_residues
MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALXTSFTVMGLILFVMS
LLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFL
FMEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM
GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL
>Mature_278_residues
SSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALXTSFTVMGLILFVMSL
LGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLF
MEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKMG
LKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31309; Mature: 31178

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIP
CCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIMALXTSFTVMGLILFVMSLLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLFMEHFSPEPPNEPLVDWACL
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIP
CCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIMALXTSFTVMGLILFVMSLLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLFMEHFSPEPPNEPLVDWACL
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA