| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752436
GI number: 16752436
Start: 145640
End: 146392
Strand: Direct
Name: Not Available
Synonym: CP0143
Alternate gene names: 16752436
Gene position: 145640-146392 (Clockwise)
Preceding gene: 16752435
Following gene: 16752438
Centisome position: 11.84
GC content: 38.91
Gene sequence:
>753_bases GTGAAGATAAAATTTTCTTGGAAGGTAAATTTTTTAATATGTTTACTGGCTGTGGGACTGATCTTTTTCGGGTGCTCTCG AGTAAAAAGAGAAGTTCTCGTAGGTCGTGATGCCACCTGGTTTCCAAAACAATTCGGCATTTATACATCCGATACCAACG CATTTTTAAACGATCTTGTTTCTGAGATTAACTATAAAGAGAATCTAAATATTAATATTGTAAATCAAGATTGGGTGCAT CTCTTTGAGAATTTAGATGATAAAAAGACCCAAGGAGCATTTACATCTGTATTGCCTACTCTTGAGATGCTCGAACACTA TCAATTTTCTGATCCCATTTTACTCACAGGTCCTGTCCTTGTCGTCGCTCAAGACTCTCCTTACCAATCTATAGAGGATC TTAAAGGTCGTCTTATTGGAGTGTATAAGTTTGACTCTTCAGTTCTTGTAGCTCAAAATATCCCTGACGCTGTGATTAGC CTCTACCAACATGTTCCAATAGCATTGGAAGCCTTAACATCGAATTGTTACGACGCTCTTCTAGCTCCTGTAATTGAAGT GACCGCGCTAATAGAAACAGCATATAAAGGAAGACTGAAAATTATTTCAAAACCCTTAAACGCAGATGGTTTGCGGCTTG CAATACTGAAAGGGACAAACGGAGATTTGCTTGAAGGGTTTAACGCAGGACTTGTGAAAACACGACGCTCAGGAAAATAC GATGCTATAAAACAGCGGTATCGTCTTCCCTAA
Upstream 100 bases:
>100_bases ATCCCTCTTCTTTAAAATTAGGCTTTATAGCGCGCTGGATAAAAATTTCTTATCTAGAATATGATGCAAAAAGAGGCAGA ACAGCGAGGCACAGCTAAAC
Downstream 100 bases:
>100_bases AATCTTATCGAATCCCTGTGTGTTTTTTCCCGCTCTTTATTAACTCCTCGGCAACTACTGTAGAGTTTTCTTTCACGATA TCTACCAAAGTCGATACCCA
Product: amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTSDTNAFLNDLVSEINYKENLNINIVNQDWVH LFENLDDKKTQGAFTSVLPTLEMLEHYQFSDPILLTGPVLVVAQDSPYQSIEDLKGRLIGVYKFDSSVLVAQNIPDAVIS LYQHVPIALEALTSNCYDALLAPVIEVTALIETAYKGRLKIISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKY DAIKQRYRLP
Sequences:
>Translated_250_residues MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTSDTNAFLNDLVSEINYKENLNINIVNQDWVH LFENLDDKKTQGAFTSVLPTLEMLEHYQFSDPILLTGPVLVVAQDSPYQSIEDLKGRLIGVYKFDSSVLVAQNIPDAVIS LYQHVPIALEALTSNCYDALLAPVIEVTALIETAYKGRLKIISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKY DAIKQRYRLP >Mature_250_residues MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTSDTNAFLNDLVSEINYKENLNINIVNQDWVH LFENLDDKKTQGAFTSVLPTLEMLEHYQFSDPILLTGPVLVVAQDSPYQSIEDLKGRLIGVYKFDSSVLVAQNIPDAVIS LYQHVPIALEALTSNCYDALLAPVIEVTALIETAYKGRLKIISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKY DAIKQRYRLP
Specific function: Involved In A Glutamine-Transport System Glnhpq. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28044; Mature: 28044
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTSDTNAFLNDLV CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCHHHHHHHHH SEINYKENLNINIVNQDWVHLFENLDDKKTQGAFTSVLPTLEMLEHYQFSDPILLTGPVL HHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEE VVAQDSPYQSIEDLKGRLIGVYKFDSSVLVAQNIPDAVISLYQHVPIALEALTSNCYDAL EEECCCCHHHHHHHCCEEEEEEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH LAPVIEVTALIETAYKGRLKIISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCEECCCCCCH DAIKQRYRLP HHHHHHHCCC >Mature Secondary Structure MKIKFSWKVNFLICLLAVGLIFFGCSRVKREVLVGRDATWFPKQFGIYTSDTNAFLNDLV CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCHHHHHHHHH SEINYKENLNINIVNQDWVHLFENLDDKKTQGAFTSVLPTLEMLEHYQFSDPILLTGPVL HHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEE VVAQDSPYQSIEDLKGRLIGVYKFDSSVLVAQNIPDAVISLYQHVPIALEALTSNCYDAL EEECCCCHHHHHHHCCEEEEEEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH LAPVIEVTALIETAYKGRLKIISKPLNADGLRLAILKGTNGDLLEGFNAGLVKTRRSGKY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCEECCCCCCH DAIKQRYRLP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA