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The map label for this gene is rpmC

Identifier: 16752401

GI number: 16752401

Start: 115627

End: 115845

Strand: Direct

Name: rpmC

Synonym: CP0108

Alternate gene names: 16752401

Gene position: 115627-115845 (Clockwise)

Preceding gene: 16752400

Following gene: 16752402

Centisome position: 9.4

GC content: 35.62

Gene sequence:

>219_bases
ATGGCTGCTAAAAAGGATTTATTGACCCAGTTAAGGGGCAAAAGCGACGACGATTTAGATGCGTATGTTCATGAAAACAA
AAAGGCTTTGTTTGCTTTAAGAGCAGAAAATTTACTGCAAAACAAAGTTGTGAAAGTTCATATGTTTTCTACGCATAAGA
AAAATATTGCTCGAGCTCTAACAGTAAAACAAGAAAGAAAAGGTAAAGTCCATGGCTAG

Upstream 100 bases:

>100_bases
CGAATGTCTCTAAAGAAGATGCTCAAGATGCCCTCCGAAGAGCTGCTGCCAAACTAGGAATAAAAACACGTTTTGTTAAG
CGAGTGGAAAGGGTATAAAC

Downstream 100 bases:

>100_bases
TGAACCAAGAGGCTCTAGAAAAGTTAAGATTGGTGTTGTTGTCTCGGCAAAAATGGAAAAAACTGTCGTTGTTCGAGTAG
AAAGGATATTTTCTCATCCT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAAKKDLLTQLRGKSDDDLDAYVHENKKALFALRAENLLQNKVVKVHMFSTHKKNIARALTVKQERKGKVHG

Sequences:

>Translated_72_residues
MAAKKDLLTQLRGKSDDDLDAYVHENKKALFALRAENLLQNKVVKVHMFSTHKKNIARALTVKQERKGKVHG
>Mature_71_residues
AAKKDLLTQLRGKSDDDLDAYVHENKKALFALRAENLLQNKVVKVHMFSTHKKNIARALTVKQERKGKVHG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_CHLPN (Q9Z7R5)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A72055
- PIR:   D86570
- RefSeq:   NP_224835.1
- RefSeq:   NP_300695.1
- RefSeq:   NP_444660.1
- RefSeq:   NP_876937.1
- ProteinModelPortal:   Q9Z7R5
- SMR:   Q9Z7R5
- GeneID:   1467344
- GeneID:   895351
- GeneID:   918771
- GeneID:   963484
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0108
- KEGG:   cpn:CPn0639
- KEGG:   cpt:CpB0665
- TIGR:   CP_0108
- HOGENOM:   HBG414103
- OMA:   DAFIHEN
- ProtClustDB:   PRK00306
- BioCyc:   CPNE115711:CP_0108-MONOMER
- BioCyc:   CPNE115713:CPN0639-MONOMER
- BioCyc:   CPNE138677:CPJ0639-MONOMER
- BioCyc:   CPNE182082:CPB0665-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8197; Mature: 8065

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKKDLLTQLRGKSDDDLDAYVHENKKALFALRAENLLQNKVVKVHMFSTHKKNIARAL
CCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHH
TVKQERKGKVHG
HHHHHCCCCCCC
>Mature Secondary Structure 
AAKKDLLTQLRGKSDDDLDAYVHENKKALFALRAENLLQNKVVKVHMFSTHKKNIARAL
CCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHH
TVKQERKGKVHG
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362