| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752231
GI number: 16752231
Start: 1153657
End: 1155123
Strand: Direct
Name: Not Available
Synonym: CP1062
Alternate gene names: NA
Gene position: 1153657-1155123 (Clockwise)
Preceding gene: 16752230
Following gene: 16752232
Centisome position: 93.8
GC content: 46.28
Gene sequence:
>1467_bases ATGTCTATTTCATCTTCTTCAGGACCTGACAATCAAAAAAATATCATGTCTCAAGTTCTGACATCGACACCCCAGGGCGT GCCCCAACAAGATAAGCTGTCTGGCAACGAAACGAAGCAAATACAGCAAACACGTCAGGGTAAAAACACTGAGATGGAAA GCGATGCCACTATTGCTGGTGCTTCTGGAAAAGACAAAACTTCCTCGACTACAAAAACAGAAACAGCTCCACAACAGGGA GTTGCTGCTGGGAAAGAATCCTCAGAAAGTCAAAAGGCAGGTGCTGATACTGGAGTATCAGGAGCGGCTGCTACTACAGC ATCAAATACTGCAACAAAAATTGCTATGCAGACCTCTATTGAAGAGGCGAGCAAAAGTATGGAGTCTACCTTAGAGTCAC TTCAAAGCCTCAGTGCCGCGCAAATGAAAGAAGTCGAAGCGGTTGTTGTTGCTGCCCTCTCAGGGAAAAGTTCGGGTTCC GCAAAATTGGAAACACCTGAGCTCCCCAAGCCCGGGGTGACACCAAGATCAGAGGTTATCGAAATCGGACTCGCGCTTGC TAAAGCAATTCAGACATTGGGAGAAGCCACAAAATCTGCCTTATCTAACTATGCAAGTACACAAGCACAAGCAGACCAAA CAAATAAACTAGGTCTAGAAAAGCAAGCGATAAAAATCGATAAAGAACGAGAAGAATACCAAGAGATGAAGGCTGCCGAA CAGAAGTCTAAAGATCTCGAAGGAACAATGGATACTGTCAATACTGTGATGATCGCGGTTTCTGTTGCCATTACAGTTAT TTCTATTGTTGCTGCTATTTTTACATGCGGAGCTGGACTCGCTGGACTCGCTGCGGGAGCTGCTGTAGGTGCAGCGGCAG CTGGAGGTGCAGCAGGAGCTGCTGCCGCAACCACGGTAGCAACACAAATTACAGTTCAAGCTGTTGTCCAAGCGGTGAAA CAAGCTGTTATCACAGCTGTCAGACAAGCGATCACCGCGGCTATAAAAGCGGCTGTCAAATCTGGAATAAAAGCATTTAT CAAAACTTTAGTCAAAGCGATTGCCAAAGCCATTTCTAAAGGAATCTCTAAGGTTTTCGCTAAGGGAACTCAAATGATTG CGAAGAACTTCCCCAAGCTCTCGAAAGTCATCTCGTCTCTTACCAGTAAATGGGTCACGGTTGGGGTTGGGGTTGTAGTT GCGGCGCCTGCTCTCGGTAAAGGGATTATGCAAATGCAGCTCTCGGAGATGCAACAAAACGTCGCTCAATTTCAGAAAGA AGTCGGAAAACTGCAGGCTGCGGCTGATATGATTTCTATGTTCACTCAATTTTGGCAACAGGCAAGTAAAATTGCCTCAA AACAAACAGGCGAGTCTAATGAAATGACTCAAAAAGCTACCAAGCTGGGCGCTCAAATCCTTAAAGCGTATGCCGCAATC AGCGGAGCCATCGCTGGCGCAGCATAA
Upstream 100 bases:
>100_bases AGTACACGGATTAAAAAACCTAACCACTGTAGTTAATAAACAAATGGTTAAAGGCGCTGAGTAAAGCCCTTTGCAGAATC AAACCCCTTAGGATACAAAC
Downstream 100 bases:
>100_bases AACCAATAATTTTTAAAGGAGCATGTATTGCTATGACATCAGGAGTTAGTGGAAGTTCAAGTCAGGATCCCACATTGGCT GCGCAATTGGCACAATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQG VAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGS AKLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVK QAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVV AAPALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI SGAIAGAA
Sequences:
>Translated_488_residues MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQG VAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGS AKLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVK QAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVV AAPALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI SGAIAGAA >Mature_487_residues SISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQGV AAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSA KLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAEQ KSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVKQ AVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVA APALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAIS GAIAGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49819; Mature: 49688
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAG CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEC ASGKDKTSSTTKTETAPQQGVAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSI CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH EEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSAKLETPELPKPGVTPRSEVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH EIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH AAATTVATQITVQAVVQAVKQAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVAAPALGKGIMQMQLSEMQQN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SGAIAGAA HHHHHCCC >Mature Secondary Structure SISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAG CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEC ASGKDKTSSTTKTETAPQQGVAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSI CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH EEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSAKLETPELPKPGVTPRSEVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH EIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH AAATTVATQITVQAVVQAVKQAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVAAPALGKGIMQMQLSEMQQN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SGAIAGAA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA