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Identifier: 16752217

GI number: 16752217

Start: 1139075

End: 1139944

Strand: Direct

Name: Not Available

Synonym: CP1048

Alternate gene names: 16752217

Gene position: 1139075-1139944 (Clockwise)

Preceding gene: 16752216

Following gene: 16752229

Centisome position: 92.62

GC content: 42.76

Gene sequence:

>870_bases
ATGGGAATCTCTCTACCAGAGCTTTTTTCCAACCTAGGTTCTGCTTACTTAGATTATATCTTTCAACATCCTCCGGCCTA
TGTTTGGTCAGTTTTTCTTCTTTTATTAGCCCGTCTGCTTCCTATTTTTGCTGTAGCTCCCTTCTTAGGAGCAAAGCTCT
TTCCCTCCCCTATTAAAATCGGGATTAGTCTCTCTTGGCTTGCAATCATCTTTCCAAAAGTCTTGGCGGATACGCAGATC
ACAAATTACATGGATAACAATCTCTTTTATGTTTTACTTGTGAAGGAGATGATCATAGGCATTGTGATAGGCTTTGTTTT
AGCATTTCCCTTTTATGCTGCACAATCGGCAGGATCTTTCATCACTAACCAACAAGGGATTCAGGGTTTAGAGGGCGCGA
CATCCCTGATTTCCATTGAGCAGACCTCTCCGCATGGCATTTTATACCATTACTTCGTGACTATTATTTTTTGGTTAGTG
GGTGGTCACCGTATTGTAATCTCTTTGTTATTGCAAACTCTTGAAGTCATTCCGATCCATAGTTTCTTTCCTGCCGAGAT
GATGAGCTTAAGTGCCCCGATTTGGATTACTATGATCAAGATGTGCCAGCTCTGTCTCGTGATGACCATACAGCTGAGTG
CTCCTGCAGCTTTGGCGATGTTAATGTCCGACCTATTCTTAGGGATTATTAACCGTATGGCACCTCAAGTTCAGGTCATC
TACCTCCTCTCTGCCCTTAAGGCTTTCATGGGTCTTCTCTTTCTCACCCTGGCGTGGTGGTTCATAATTAAGCAGATAGA
TTATTTCACTCTTGCTTGGTTCAAAGAAGTCCCCATTATGCTCCTAGGTTCCAACCCTCAAGTACTCTAA

Upstream 100 bases:

>100_bases
TTTGGAACCTTAATGATCTCTGGAGGGTGGCTTAGCAATATGATTTTACGCTTTGCAGGTCAGATTTTCCAAAACTTCTA
TAAATGGAAATAAAGAGCTT

Downstream 100 bases:

>100_bases
TCCCCTAGGCTCTTATCGTGACTCTTATCTGGAGATGCGCTCACTTACGAATCTTAGCGCACTGTTTATGGATTATCTTA
GGGAATCTCTCGCATATTCT

Product: type III secretion inner membrane protein SctT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGISLPELFSNLGSAYLDYIFQHPPAYVWSVFLLLLARLLPIFAVAPFLGAKLFPSPIKIGISLSWLAIIFPKVLADTQI
TNYMDNNLFYVLLVKEMIIGIVIGFVLAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGILYHYFVTIIFWLV
GGHRIVISLLLQTLEVIPIHSFFPAEMMSLSAPIWITMIKMCQLCLVMTIQLSAPAALAMLMSDLFLGIINRMAPQVQVI
YLLSALKAFMGLLFLTLAWWFIIKQIDYFTLAWFKEVPIMLLGSNPQVL

Sequences:

>Translated_289_residues
MGISLPELFSNLGSAYLDYIFQHPPAYVWSVFLLLLARLLPIFAVAPFLGAKLFPSPIKIGISLSWLAIIFPKVLADTQI
TNYMDNNLFYVLLVKEMIIGIVIGFVLAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGILYHYFVTIIFWLV
GGHRIVISLLLQTLEVIPIHSFFPAEMMSLSAPIWITMIKMCQLCLVMTIQLSAPAALAMLMSDLFLGIINRMAPQVQVI
YLLSALKAFMGLLFLTLAWWFIIKQIDYFTLAWFKEVPIMLLGSNPQVL
>Mature_288_residues
GISLPELFSNLGSAYLDYIFQHPPAYVWSVFLLLLARLLPIFAVAPFLGAKLFPSPIKIGISLSWLAIIFPKVLADTQIT
NYMDNNLFYVLLVKEMIIGIVIGFVLAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGILYHYFVTIIFWLVG
GHRIVISLLLQTLEVIPIHSFFPAEMMSLSAPIWITMIKMCQLCLVMTIQLSAPAALAMLMSDLFLGIINRMAPQVQVIY
LLSALKAFMGLLFLTLAWWFIIKQIDYFTLAWFKEVPIMLLGSNPQVL

Specific function: Part of a type III secretion system [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 32330; Mature: 32198

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
>Mature Secondary Structure 
GISLPELFSNLGSAYLDYIFQHPPAYVWSVFLLLLARLLPIFAVAPFLGAKLFPSPIKI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
GISLSWLAIIFPKVLADTQITNYMDNNLFYVLLVKEMIIGIVIGFVLAFPFYAAQSAGSF
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ITNQQGIQGLEGATSLISIEQTSPHGILYHYFVTIIFWLVGGHRIVISLLLQTLEVIPIH
HCCHHCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
SFFPAEMMSLSAPIWITMIKMCQLCLVMTIQLSAPAALAMLMSDLFLGIINRMAPQVQVI
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHH
YLLSALKAFMGLLFLTLAWWFIIKQIDYFTLAWFKEVPIMLLGSNPQVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]