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Identifier: 16752178

GI number: 16752178

Start: 1091720

End: 1092520

Strand: Direct

Name: Not Available

Synonym: CP1008

Alternate gene names: NA

Gene position: 1091720-1092520 (Clockwise)

Preceding gene: 16752177

Following gene: 16752179

Centisome position: 88.77

GC content: 43.0

Gene sequence:

>801_bases
ATGACCCTACCTCTAGAACCAATGATTTTTTGGTCCTCGCTATCAGCAAAAGTTATGAAAAAATTCCTTACACCACATTG
TGCGGGCACGTTTTCTGAAGAGGATGCTGAAGCTAAAGAAGCACATCTGGTCACTGGAAAACAGGGGCACAGACTGATGG
GCAACTGCGTCACTTTTTATTGGCTTGTGGATAAGAAAAATGGCGTAATCCTGGATGCAAAATTCCAATACTTTGGTCAC
CCTTATCTAATCCCACTAGCGGAGGCTGTCTGCAATCTTGTTTGTGGGAAAAGCTATRGCGAAGCTTACAAGATGACTCT
TGATGATATTGATAAATCCTTACGCGTACACGCACACCAACCCGCTCTTCCTGAAGATAGCATCTCGCTATACCATTTTG
TTATTGATGCCTTAGATACAGCTGTTGAGCAATGTCTTGAAATCCCCTTAGAGGATGGCTCGCTTCCTTTGCAAAATTCT
CCCATGAACCTTGATTTCGAAGACGCGAATCCCTATAGCCAGAGTGATTGGGAAGCTCTCACTCACGAACAAAAGCTCTA
TGCTCTTCGCGCTACAATAGCAGAAAAAATCGGCCCTTACATTGCTATGGACGGAGGTGAAGTAACTGTAGAATCCCTAG
AAAACTTTATTGTCACAATTGCCTATTCTGGGAATTGTTCTGGATGTCCTTCGTCATTAGGATCTACTTTAAATTCCATA
GGGCAGCTCCTAAGAGCCTATATCTACCCTGAACTTCAAGTGAAGGTAGATGAATCATCATTAAATCTTTCTCACCCGTA
G

Upstream 100 bases:

>100_bases
TCTCTCTTACAGAAAGAAGTAAAGACCTCGAGTTTTCCAAACTTGCTCGTGCCATGCATGATGCCATTAAGCATCTTACC
CCTTTACTTGGAAGTTCCTC

Downstream 100 bases:

>100_bases
CCATCCCCCCAACTTCTTTTAGTAGAAATCCCTACATTCCTAAATACGAGTCTCTATCATTGTAGAGGCTTTCATTTCAC
GTGTTCTTGATTCCAACAAA

Product: nifU protein

Products: NA

Alternate protein names: NifU-Related Protein; Nitrogen Fixation Protein NifU; NifU Family Protein; Nitrogen-Fixing Nifu Domain Protein; NifU Protein Homolog; Iron-Sulfur Cluster Assembly Protein NifU; Nitrogen Fixation Related Protein NifU; Nitrogen-Fixing NifU Domain Protein; NifU Protein; Nifu-Like Protein; Acetolactate Synthase Small Subunit; NIFU-Like Protein; Nitrogen-Fixing NifU Domain-Containing Protein

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTLPLEPMIFWSSLSAKVMKKFLTPHCAGTFSEEDAEAKEAHLVTGKQGHRLMGNCVTFYWLVDKKNGVILDAKFQYFGH
PYLIPLAEAVCNLVCGKSYXEAYKMTLDDIDKSLRVHAHQPALPEDSISLYHFVIDALDTAVEQCLEIPLEDGSLPLQNS
PMNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSI
GQLLRAYIYPELQVKVDESSLNLSHP

Sequences:

>Translated_266_residues
MTLPLEPMIFWSSLSAKVMKKFLTPHCAGTFSEEDAEAKEAHLVTGKQGHRLMGNCVTFYWLVDKKNGVILDAKFQYFGH
PYLIPLAEAVCNLVCGKSYXEAYKMTLDDIDKSLRVHAHQPALPEDSISLYHFVIDALDTAVEQCLEIPLEDGSLPLQNS
PMNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSI
GQLLRAYIYPELQVKVDESSLNLSHP
>Mature_265_residues
TLPLEPMIFWSSLSAKVMKKFLTPHCAGTFSEEDAEAKEAHLVTGKQGHRLMGNCVTFYWLVDKKNGVILDAKFQYFGHP
YLIPLAEAVCNLVCGKSYXEAYKMTLDDIDKSLRVHAHQPALPEDSISLYHFVIDALDTAVEQCLEIPLEDGSLPLQNSP
MNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSIG
QLLRAYIYPELQVKVDESSLNLSHP

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29440; Mature: 29309

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPLEPMIFWSSLSAKVMKKFLTPHCAGTFSEEDAEAKEAHLVTGKQGHRLMGNCVTFY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCHHHCCEEEEE
WLVDKKNGVILDAKFQYFGHPYLIPLAEAVCNLVCGKSYXEAYKMTLDDIDKSLRVHAHQ
EEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC
PALPEDSISLYHFVIDALDTAVEQCLEIPLEDGSLPLQNSPMNLDFEDANPYSQSDWEAL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
THEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSI
HHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHCCEEEEEEECCCCCCCHHHHHHHHHHH
GQLLRAYIYPELQVKVDESSLNLSHP
HHHHHHHHCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
TLPLEPMIFWSSLSAKVMKKFLTPHCAGTFSEEDAEAKEAHLVTGKQGHRLMGNCVTFY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCHHHCCEEEEE
WLVDKKNGVILDAKFQYFGHPYLIPLAEAVCNLVCGKSYXEAYKMTLDDIDKSLRVHAHQ
EEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC
PALPEDSISLYHFVIDALDTAVEQCLEIPLEDGSLPLQNSPMNLDFEDANPYSQSDWEAL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
THEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSI
HHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHCCEEEEEEECCCCCCCHHHHHHHHHHH
GQLLRAYIYPELQVKVDESSLNLSHP
HHHHHHHHCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA