Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752108

GI number: 16752108

Start: 1010434

End: 1011534

Strand: Direct

Name: Not Available

Synonym: CP0938

Alternate gene names: NA

Gene position: 1010434-1011534 (Clockwise)

Preceding gene: 16752107

Following gene: 16752109

Centisome position: 82.16

GC content: 41.69

Gene sequence:

>1101_bases
TTGTCAGGAATATTTTCAAATCCTCATCCAGTTTCCTATTTTTCGTCAACACACGCCAAGCAGTTAAGTGACTTTAGTAA
GAAGCACCCCATACTCACCAAAATTGTTACGATCATTGTTAAAATTTTCAAACTCTTAATCGGTCTGATTATTCCGCCCC
TGGGAATTTATTGGTTATGTCAATTAGTATGTTCCTTGGCTCTTTTCCCCCGTTCTTCGATGCTTTACAGCGTCTTGAAA
ACCTGCTTTAAAAAGTATCGTTTGGAACAGGAAATACAAGATTATTTTGTAAAGAATCTAGATCCCTCTTTCAAAGACCC
AGCAGTCTCGGAAAGTAAAAGAATCACGATCCAACAAGACCATCTTACCATTGATACTTTAGCAATACATTTCAGTACGG
CAAGGCCTAAACGTTGGCTGCTGATTTCTCTAGGAAGTGGAGATTTCCTCGAAGACATGATAGGCCTGAAAGATTCCTTG
TTTCTCTCCTGGAAAGAGTTAGCTAAACTGCTAGGCGCTAATATCCTAATTTACAACTATCCTGGGGTTAAGTCGAGCAC
AGGAAAATTGAACTTAGAGAACCTAGCGACAGCTCATAATCTATGTGCAAAGTACCTACAAGATAAAATTCAGGGCCCTG
GGGCTAACGAAATCATCACCTACGGATATTCCTTAGGAGGGGTAGTCCAGTCTGCAGCTTTGCAAAAAAATCCTTTTACA
AATAGCGAGACTTCTTGGGTAGCAGTCAAAGACCGTGCTCCCCACTCTTTACCCGCAGCTGCTAATAGTTTCTTCGGGCC
AATAGGAAAACTCATCGCAGTCCTCGCTCGATGGAAAATGGATGCGGAAAAAAACAGCCGAGAGCTTCCTTGCCCAGAAA
TTCTTGTTTATTCTGCGGATCGATTTCGCCCTTCAGAAGTTGGTGATGATACCGCATTGCTCCCGGAGTTTACTCTTGCT
CATGCAATAAAACGAACCCCATTTGCCAGGAGTAAAAAATTTATAGGAGAGGTAAATCTACTCCACTCAAGCCCTCTGAA
ACACCCTACAATACAAAAGCTTGCTGAAGCAATCCTTGAGAGTCTCTCTAGAAAAAATTAA

Upstream 100 bases:

>100_bases
ACACTGAACTTTGTTTGACCTGACGTCCCCAGTCCCTTGAGATTAGAGACGTAAGGATTTCGCATTCACTCTTTTGAATC
TTTCAAACAGGTCTGATATT

Downstream 100 bases:

>100_bases
AAAATTATAATGCGTATTCTTTTTCTTTTGTTCTCTTTATACTCTGTGTACCTAAAATTTAGGACTCTTGTATGATCCCA
TCCCCTACCCCAATAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPRSSMLYSVLK
TCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSL
FLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFT
NSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDTALLPEFTLA
HAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN

Sequences:

>Translated_366_residues
MSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPRSSMLYSVLK
TCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSL
FLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFT
NSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDTALLPEFTLA
HAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN
>Mature_365_residues
SGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPRSSMLYSVLKT
CFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSLF
LSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFTN
SETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDTALLPEFTLAH
AIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40828; Mature: 40697

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLC
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QLVCSLALFPRSSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
HLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSLFLSWKELAKLLGANILIYNY
CEEEEHEEEEEECCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEC
PGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCC
NSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSAD
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
RFRPSEVGDDTALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SLSRKN
HHHCCC
>Mature Secondary Structure 
SGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLC
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QLVCSLALFPRSSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
HLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSLFLSWKELAKLLGANILIYNY
CEEEEHEEEEEECCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEC
PGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCC
NSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSAD
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
RFRPSEVGDDTALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SLSRKN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA