| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752004
GI number: 16752004
Start: 895741
End: 897201
Strand: Direct
Name: Not Available
Synonym: CP0831
Alternate gene names: NA
Gene position: 895741-897201 (Clockwise)
Preceding gene: 16752003
Following gene: 16752005
Centisome position: 72.83
GC content: 41.82
Gene sequence:
>1461_bases ATGAATATGCCTGTTCCTTCTGCAGTTCCCTCTGCAAATATAACTCTAAAAGAAGACAGCTCAACAGTTTCCACAGCCTC TGGAATATTAAAGACTGCAACAGGTGAAGTCTTAGTCTCTTGTACAGCGCTAGAAGGAAGCTCTTCTACAGATGCTTTAA TTAGCTTAGCTTTAGGACAAATCATTCTTGCGACCCAACAAGAACTGCTCTTACAAAGCACAAATGTTCATCAACTCCTC TTCCTCCCTCCTGAAGTTGTAGAATTAGAAATCCAAGTTGTTGACTTGCTAGTGCAATTGGAACATGCAGAGACAATCAC AAGTGAACCACAAGAAACACAAACGCAAAGTAGGAGTGAGCAGACCCTCCCTCAACAAAGCAGCAGTAAACAATCTGCTC TCTCCCCACGCTCCTTAAAACCTGAAATTTCTGATTCTAAACAACAGCAAGCTCTTCAAACACCAAAAGGCTCTGCTGTA AGAAAACACAGCGAAGCACCGTCACCTGAGACACAAGCTCGCGCTTCCTTATCTCAGGCAAGCTCAAGTTCTCAGAGATC CTTACCTCCGCAAGAAAGTGCGCCAGAAAGAACACTATTAGAACAACAAAAAGCAAGCTCCTTCTCTCCTCTATCCCAGT TCTCTGCAGAGAAACAAAAAGAGGCCCTGACGACCTCAAAATCTCATGAACTCTATAAAGAACGCGATCAAGATCGCCAA CAAAGAGAGCAGCACGACAGAAAGCACGATCAGGAAGAAGACGCTGAATCTAAAAAGAAAAAGAAGAAACGTGGTCTCGG TGTAGAGGCAGTCGCTGAGGAACCCGGAGAAAATCTAGATATTGCCGCTTTAATCTTCTCAGATCAAATGCGACCTCCTG CTGAAGAAACTTCTAAAAAAGAAACGACATTCAAAAAGAAGCTACCTTCTCCAATGTCTGTGTTTAGCAGATTCATCCCT AGTAAGAATCCGTTATCTGTAGGCTCTTCAATACACGGGCCTATACAAACTCCAAAAGTAGAAAATGTGTTCTTAAGGTT CATGAAGCTCATGGCAAGAATCTTAGGCCAAGCCGAAGCCGAAGCTAATGAACTCTACATGCGAGTCAAACAACGTACCG ATGATGTAGACACACTCACAGTCCTTATCTCTAAGATCAATAATGAAAAGAAAGACATTGATTGGAGTGAAAATGAAGAG ATGAAAGCTCTTTTAAATCGAGCTAAAGAGATTGGAGTCACTATAGACAAAGAAAAATATACTTGGACAGAAGAGGAAAA AAGACTTCTAAAAGAGAATGTCCAAATGCGCAAAGAGAATATGGAGAAAATCACTCAAATGGAAAGGACGGACATGCAAA GGCACCTCCAAGAGATTTCTCAATGTCATCAAGCGCGCTCTAATGTATTGAAGTTATTGAAAGAACTTATGGACACCTTC ATTTACAACCTACGCCCCTAA
Upstream 100 bases:
>100_bases TTATTTTCTCTTTCCCTCTAAACCGCTTACAATCAAACTTGCAGGAAAATGATGTTTTAGCTAATTTTCCTTTTTTTTCT ACGCACTCAAATTACAAATC
Downstream 100 bases:
>100_bases TGTCACATTTAAATTATTTACTAGAAAAAATCGCTGCATCTTCCAAGGAAGACTTCCCTTTCCCAGATGATTTGGAAAGC TATTTGGAAGGATATGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP
Sequences:
>Translated_486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP >Mature_486_residues MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQIILATQQELLLQSTNVHQLL FLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSEQTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAV RKHSEAPSPETQARASLSQASSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKKETTFKKKLPSPMSVFSRFIP SKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEAEANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEE MKALLNRAKEIGVTIDKEKYTWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF IYNLRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54637; Mature: 54637
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAVRKHSEAPSPETQARASLSQA HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNLRP HHHCCC >Mature Secondary Structure MNMPVPSAVPSANITLKEDSSTVSTASGILKTATGEVLVSCTALEGSSSTDALISLALGQ CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH IILATQQELLLQSTNVHQLLFLPPEVVELEIQVVDLLVQLEHAETITSEPQETQTQSRSE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QTLPQQSSSKQSALSPRSLKPEISDSKQQQALQTPKGSAVRKHSEAPSPETQARASLSQA HHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH SSSSQRSLPPQESAPERTLLEQQKASSFSPLSQFSAEKQKEALTTSKSHELYKERDQDRQ CCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQHDRKHDQEEDAESKKKKKKRGLGVEAVAEEPGENLDIAALIFSDQMRPPAEETSKK HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH ETTFKKKLPSPMSVFSRFIPSKNPLSVGSSIHGPIQTPKVENVFLRFMKLMARILGQAEA HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EANELYMRVKQRTDDVDTLTVLISKINNEKKDIDWSENEEMKALLNRAKEIGVTIDKEKY HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC TWTEEEKRLLKENVQMRKENMEKITQMERTDMQRHLQEISQCHQARSNVLKLLKELMDTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYNLRP HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA