| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357901
GI number: 13357901
Start: 388870
End: 389445
Strand: Direct
Name: Not Available
Synonym: UU341
Alternate gene names: NA
Gene position: 388870-389445 (Clockwise)
Preceding gene: 13357900
Following gene: 13357902
Centisome position: 51.73
GC content: 20.31
Gene sequence:
>576_bases ATGATAGATCGTAAACAAATTCATGTTAAAACTAGATTAACAATTAATGAGTTAAATAAGTTTTATACTTTAATTAGAGT CCAAAAACAAAGCTTAAAAGAGATTGAAGATAAAATCAAAAAACTTGATTGAATTAACTTTAGTGAGATTAAAAATCAAA ATTTATTTGATGAATTTAAATTTGATTATAAAAATATGACACCATATGTTATTTCACAAGTTCAAGATCTGGTTAGTGTT TATGATGTAAGACAAATTAGTGAAATAATTCTTGAATTAAATCAAGTTAATATTCAAATTCAAACTAAAGATAGTGAGTT TTATATTAAAAATAATAAAAAATTAAGTTTAATTAGTAGTGAATTTGAAGATTATCAATTAAAAAATTATGATGCATATG AACATTTTAAAATTACAATGGATGAACCTAAAATTCATACTTTAAATCATCAAATGCCATTTGATTCAAAATTAAACATC AAAACCATCATTTTTATAGTTTTAACTTCTTGTTTATTATGTTTATTAATCGTCATAATTATATGTGCATTATTAATTGC AGGAGTTATTAATTAA
Upstream 100 bases:
>100_bases TAGTGATTTATTTGAAATGATTAGCGGTAGTGTTATTTCTTATAAAGCGAAGTTATTTAAGTAATATTTTTAAAAGAATA ATGAAATATTAAATTATTTA
Downstream 100 bases:
>100_bases TGAAAAAATATATCAGTATCGCTATTGATGGACCTTCAGGTTCTGGAAAAAGTACAGCAGCAAAAGAATTAGCCAAGAAA TTGGGATTTTTATATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDWINFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI KTIIFIVLTSCLLCLLIVIIICALLIAGVIN
Sequences:
>Translated_191_residues MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLD*INFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI KTIIFIVLTSCLLCLLIVIIICALLIAGVIN >Mature_191_residues MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLD*INFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI KTIIFIVLTSCLLCLLIVIIICALLIAGVIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22479; Mature: 22479
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDINFSEIKNQNLFDEFKF CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHC DYKNMTPYVISQVQDLVSVYDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEEEHHC FEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNIKTIIFIVLTSCLLCLLIVIII CCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH CALLIAGVIN HHHHHHHCCC >Mature Secondary Structure MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDINFSEIKNQNLFDEFKF CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHC DYKNMTPYVISQVQDLVSVYDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEEEHHC FEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNIKTIIFIVLTSCLLCLLIVIII CCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH CALLIAGVIN HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA