Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357901

GI number: 13357901

Start: 388870

End: 389445

Strand: Direct

Name: Not Available

Synonym: UU341

Alternate gene names: NA

Gene position: 388870-389445 (Clockwise)

Preceding gene: 13357900

Following gene: 13357902

Centisome position: 51.73

GC content: 20.31

Gene sequence:

>576_bases
ATGATAGATCGTAAACAAATTCATGTTAAAACTAGATTAACAATTAATGAGTTAAATAAGTTTTATACTTTAATTAGAGT
CCAAAAACAAAGCTTAAAAGAGATTGAAGATAAAATCAAAAAACTTGATTGAATTAACTTTAGTGAGATTAAAAATCAAA
ATTTATTTGATGAATTTAAATTTGATTATAAAAATATGACACCATATGTTATTTCACAAGTTCAAGATCTGGTTAGTGTT
TATGATGTAAGACAAATTAGTGAAATAATTCTTGAATTAAATCAAGTTAATATTCAAATTCAAACTAAAGATAGTGAGTT
TTATATTAAAAATAATAAAAAATTAAGTTTAATTAGTAGTGAATTTGAAGATTATCAATTAAAAAATTATGATGCATATG
AACATTTTAAAATTACAATGGATGAACCTAAAATTCATACTTTAAATCATCAAATGCCATTTGATTCAAAATTAAACATC
AAAACCATCATTTTTATAGTTTTAACTTCTTGTTTATTATGTTTATTAATCGTCATAATTATATGTGCATTATTAATTGC
AGGAGTTATTAATTAA

Upstream 100 bases:

>100_bases
TAGTGATTTATTTGAAATGATTAGCGGTAGTGTTATTTCTTATAAAGCGAAGTTATTTAAGTAATATTTTTAAAAGAATA
ATGAAATATTAAATTATTTA

Downstream 100 bases:

>100_bases
TGAAAAAATATATCAGTATCGCTATTGATGGACCTTCAGGTTCTGGAAAAAGTACAGCAGCAAAAGAATTAGCCAAGAAA
TTGGGATTTTTATATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDWINFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV
YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI
KTIIFIVLTSCLLCLLIVIIICALLIAGVIN

Sequences:

>Translated_191_residues
MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLD*INFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV
YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI
KTIIFIVLTSCLLCLLIVIIICALLIAGVIN
>Mature_191_residues
MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLD*INFSEIKNQNLFDEFKFDYKNMTPYVISQVQDLVSV
YDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSEFEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNI
KTIIFIVLTSCLLCLLIVIIICALLIAGVIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22479; Mature: 22479

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDINFSEIKNQNLFDEFKF
CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHC
DYKNMTPYVISQVQDLVSVYDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEEEHHC
FEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNIKTIIFIVLTSCLLCLLIVIII
CCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CALLIAGVIN
HHHHHHHCCC
>Mature Secondary Structure
MIDRKQIHVKTRLTINELNKFYTLIRVQKQSLKEIEDKIKKLDINFSEIKNQNLFDEFKF
CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHC
DYKNMTPYVISQVQDLVSVYDVRQISEIILELNQVNIQIQTKDSEFYIKNNKKLSLISSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEEEHHC
FEDYQLKNYDAYEHFKITMDEPKIHTLNHQMPFDSKLNIKTIIFIVLTSCLLCLLIVIII
CCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CALLIAGVIN
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA