Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357900

GI number: 13357900

Start: 387667

End: 388833

Strand: Direct

Name: Not Available

Synonym: UU340

Alternate gene names: NA

Gene position: 387667-388833 (Clockwise)

Preceding gene: 13357899

Following gene: 13357901

Centisome position: 51.57

GC content: 25.79

Gene sequence:

>1167_bases
ATGTATAAGTTAATATTTAATTTATGTATATATATTAAAAATAAAGGAAAATTTGAGTATATGGTAGAAAATAAATTTTT
AAAGCAAATTAAAGAGGGAGAGCAAATTAAAATTGAAATTAAAGGTTTGGATAAATTTAATAATTTTGACGAACAAAATT
ATGGTTTAAATAATATTTCACCTCAAATTCGTTGATCACCAGTACTTGAAACAGCAAGTTATGCGGTTGCAATTATTGAT
TATGAAGCAGTAGGAGGCGCTCCATTTGTGCATTGATATGCCTTAAACATTTTTGAACCCGAATTAGCATTAAATGTTGC
AAATCTTGGTTATGCTAATTTATATCAAGGTGAAAATTCAACTTCAAAACATTTTTCACATTCAATATTAGATGCAAATT
ATCAAACTGATATAGCAAATAATTATTTCCCTCCTTGCCCGCCAAATAAATCACATAAATATGAAATTAAAGTTTATGCA
GTGCATCATAAGCTATCAACAAACCGAAACAATATTTTATATTTAGACGATTTTGAAGCGAAATTAAATGAAGCAAAAAT
TATTGCCACAGGTTCTACTTATGTTTGTGCTCCACAGATTAGTTTTGAAGATGATAAATTAATTATTGGTTCATTAGAGC
ATAAACATCCTTATTTGTTTGCTAATTGTGAAAATGAATATCATGTAATAGAAGATGTAATTGTTACAGATATTAATAAG
AATATTTATAGTGAAAATCAACTAGATAATTTTAAAGATCTAGAACAAGCAAAAATTAAAATTATTGATTCTAGTGATGC
TTTATCGTATGCAGTTATAATTACTTCAAATCATCTATTTAAAAAATTTGGTCGTCCAGTTGTTAATTATGCACACGTTA
TCGAGAAAAAAACTAATAAACGAATTAAGTTCAATAATTCCTACAAATTAAATCATGCCTTTAGCGAAATTAGTCCTTCA
AAATATGATCATTTAGGTAATGAATTATTGATTTTAGAAGATAAAGATGCTAATTTTGAAAGTGGACTATTCACAATTCA
TGTGTTTGGATTAAATAAAAAAATTAAGTATTTAAATAAGATTGATAGTGTTGCAAATTCAATTAGTGATTTATTTGAAA
TGATTAGCGGTAGTGTTATTTCTTATAAAGCGAAGTTATTTAAGTAA

Upstream 100 bases:

>100_bases
AGATGATGTTACTGAAGCAACTGTAACTGATGATTCAACAAAGAAATAATTAATTTTAATAACCAATGGTTTAAATACCA
TTGGTTATTGTTATATAATA

Downstream 100 bases:

>100_bases
TATTTTTAAAAGAATAATGAAATATTAAATTATTTAATGATAGATCGTAAACAAATTCATGTTAAAACTAGATTAACAAT
TAATGAGTTAAATAAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MYKLIFNLCIYIKNKGKFEYMVENKFLKQIKEGEQIKIEIKGLDKFNNFDEQNYGLNNISPQIRWSPVLETASYAVAIID
YEAVGGAPFVHWYALNIFEPELALNVANLGYANLYQGENSTSKHFSHSILDANYQTDIANNYFPPCPPNKSHKYEIKVYA
VHHKLSTNRNNILYLDDFEAKLNEAKIIATGSTYVCAPQISFEDDKLIIGSLEHKHPYLFANCENEYHVIEDVIVTDINK
NIYSENQLDNFKDLEQAKIKIIDSSDALSYAVIITSNHLFKKFGRPVVNYAHVIEKKTNKRIKFNNSYKLNHAFSEISPS
KYDHLGNELLILEDKDANFESGLFTIHVFGLNKKIKYLNKIDSVANSISDLFEMISGSVISYKAKLFK

Sequences:

>Translated_388_residues
MYKLIFNLCIYIKNKGKFEYMVENKFLKQIKEGEQIKIEIKGLDKFNNFDEQNYGLNNISPQIR*SPVLETASYAVAIID
YEAVGGAPFVH*YALNIFEPELALNVANLGYANLYQGENSTSKHFSHSILDANYQTDIANNYFPPCPPNKSHKYEIKVYA
VHHKLSTNRNNILYLDDFEAKLNEAKIIATGSTYVCAPQISFEDDKLIIGSLEHKHPYLFANCENEYHVIEDVIVTDINK
NIYSENQLDNFKDLEQAKIKIIDSSDALSYAVIITSNHLFKKFGRPVVNYAHVIEKKTNKRIKFNNSYKLNHAFSEISPS
KYDHLGNELLILEDKDANFESGLFTIHVFGLNKKIKYLNKIDSVANSISDLFEMISGSVISYKAKLFK
>Mature_388_residues
MYKLIFNLCIYIKNKGKFEYMVENKFLKQIKEGEQIKIEIKGLDKFNNFDEQNYGLNNISPQIR*SPVLETASYAVAIID
YEAVGGAPFVH*YALNIFEPELALNVANLGYANLYQGENSTSKHFSHSILDANYQTDIANNYFPPCPPNKSHKYEIKVYA
VHHKLSTNRNNILYLDDFEAKLNEAKIIATGSTYVCAPQISFEDDKLIIGSLEHKHPYLFANCENEYHVIEDVIVTDINK
NIYSENQLDNFKDLEQAKIKIIDSSDALSYAVIITSNHLFKKFGRPVVNYAHVIEKKTNKRIKFNNSYKLNHAFSEISPS
KYDHLGNELLILEDKDANFESGLFTIHVFGLNKKIKYLNKIDSVANSISDLFEMISGSVISYKAKLFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44155; Mature: 44155

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLIFNLCIYIKNKGKFEYMVENKFLKQIKEGEQIKIEIKGLDKFNNFDEQNYGLNNIS
CHHEEEEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PQIRSPVLETASYAVAIIDYEAVGGAPFVHYALNIFEPELALNVANLGYANLYQGENSTS
HHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCHHEEEEECCCCEEEECCCCCCH
KHFSHSILDANYQTDIANNYFPPCPPNKSHKYEIKVYAVHHKLSTNRNNILYLDDFEAKL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCC
NEAKIIATGSTYVCAPQISFEDDKLIIGSLEHKHPYLFANCENEYHVIEDVIVTDINKNI
CCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEHHHHEECCCCCC
YSENQLDNFKDLEQAKIKIIDSSDALSYAVIITSNHLFKKFGRPVVNYAHVIEKKTNKRI
CCCCCCCCHHHHCCEEEEEEECCCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCEE
KFNNSYKLNHAFSEISPSKYDHLGNELLILEDKDANFESGLFTIHVFGLNKKIKYLNKID
EECCCEEEECHHHHCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHH
SVANSISDLFEMISGSVISYKAKLFK
HHHHHHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure
MYKLIFNLCIYIKNKGKFEYMVENKFLKQIKEGEQIKIEIKGLDKFNNFDEQNYGLNNIS
CHHEEEEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PQIRSPVLETASYAVAIIDYEAVGGAPFVHYALNIFEPELALNVANLGYANLYQGENSTS
HHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCHHEEEEECCCCEEEECCCCCCH
KHFSHSILDANYQTDIANNYFPPCPPNKSHKYEIKVYAVHHKLSTNRNNILYLDDFEAKL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCC
NEAKIIATGSTYVCAPQISFEDDKLIIGSLEHKHPYLFANCENEYHVIEDVIVTDINKNI
CCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEHHHHEECCCCCC
YSENQLDNFKDLEQAKIKIIDSSDALSYAVIITSNHLFKKFGRPVVNYAHVIEKKTNKRI
CCCCCCCCHHHHCCEEEEEEECCCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCEE
KFNNSYKLNHAFSEISPSKYDHLGNELLILEDKDANFESGLFTIHVFGLNKKIKYLNKID
EECCCEEEECHHHHCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHH
SVANSISDLFEMISGSVISYKAKLFK
HHHHHHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA