| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357898
GI number: 13357898
Start: 383742
End: 385628
Strand: Direct
Name: Not Available
Synonym: UU338
Alternate gene names: NA
Gene position: 383742-385628 (Clockwise)
Preceding gene: 13357897
Following gene: 13357899
Centisome position: 51.05
GC content: 23.21
Gene sequence:
>1887_bases ATGATTGACAAGCAAAAAATTAAACAACTAATCCAAAATCCTGTTTATGGATTTTTTGATGAATTTAAAAAAAATTTAAA CAGCGATCTTGATCATGTAATTTTAGAACAATTAAAAGATCAAGATAATAATATTGATAAAATTAATCATTTAGTAACCG ATATTAATAATTTAAAAAATGATATTAAACAACGCAAAAAAGATGAAAAAATTAAACAACGGACTTTTTGTAATATTCTA ATCGCAGTTTGTTTTGTTATTATTATTGGTTTGTTTTTTTTACATTTTTATTTGAAAAATTCCAAATTTATTAAAAATTT TAAAAAGTATGAAATTGAAAAAAATAATCAAATTAATATATGTAACAGCCAAAAAAATAAATATATTTATAATGTTTTAT CACAAATTAATTCTTATAAAATTTCGCAAGAAATTTTTGCTAAGAATGGTTTATATTTAATGCCAGAAATTCAATATGAA AATATTAAACAAACCGATTTATTAATTTCACGAAACGCAAAATTTGTTGGATTTTTTGGTGGTTTAGAAGTTAAATTTAA AAGTACGGATACTTTTTTAGTGTATTATAAGGAATTTTCAATTAAAGATGTTGTAACAAGTGGTTGTATTCAAATTTCTT ATCGAAAAGGAGATCAAATGGTTAGTGAAACGATCGTTGCTCATCATAAGGAACCAACACCGTTTGTTGATCTTCACAGT AATTTTGTTCATAAAACTAATTACTCTCCAAACTTTAACTTTTCAACGTACGCTCAAACTGTTAATTCTCGTTCAAAAAC AATTTTTTCTAATTTAGAATTTTCTAAGTATTATGGCTTAGGAATTGCTACTCAAAATTTAGAATTTGATACAAAAATGC TAGAATTTTTTACGCCTTTTAGTCAAGAAAACTATGAAAATTTTGCTAAATATTTAAAACAAGATGATATCACAGTTCCT ATGTTTACAAAAACTGCGACATCCCTTATTATTGATGATCAATTATTAAAAGATAATAGAAAACCATTCTTTATAAATTT ATTAACAAATAATAGTTATGTAAAAACTTGTGATTTTCTAATTGATACAGATATTAATGCGGACCTACAAACGAATTTAA ATATTTTAAAATATGAATTAGTAAAATTATTTGAAAAATATATTTTATATTTAACTACAACAAGTTTATCAAGTGTAATT GCCCGAGAATGATATATTAATAATGATACTTATAAAATTGGTGATAATTACGATTATGAAAGTTATTATTATACTAATCA AAATCAATTAACTCCACTATCAGTTTCGACAAAACTTTTTTTAAAAAACCAAATAGCTTTTGTTAATGATTGTGAAGTAA TTCCTTTTGCTGAACTAGTTAATAATCAAACACGATTCGGCATTAATAAAGCACAGTTTAATATTAAAAGTTATCATGTT TATAATCGTGTAGATAATGTACCAGTATATGCGCATGGCAGAACACACATTGTTCCTGTACAATACAAAGAGTACATCGA ATATGAATATCCATTTATTTGTTTATATGTTTTAAAATATAAACAGTTAACAGAAGAAATAGGTTTAAAATATTTTACAC GCCCATTTAATAATATTTTATTAACAAATTTTGAAGATCATAGTGCTTGTTCTATTGATGAAATTCTTGATTTTAATGAT AATGAATCCAAAAATAATAGCGATAATGATTTTAAAATTTATTTAAAAGAATTAGATACAATCGTCACAAATGCGAATTT AAATAAAAATGAATTTAGCTTCTTAAAAGACAATGATGGTTATTTCATTACGATAAGTAATAAAATAGAATTAGACGAAG AAACTGAACAAGAATTATCAACTTGATTAAGAAAAGTAAGCTTATAG
Upstream 100 bases:
>100_bases TTATTTTTGAATTATTTTAAATAAGTGTTACTTATCAGCCATATTTTTTTGTAGTATTATATAATAATATAAATAATCAA ATAAGAAAATAGTATTTATT
Downstream 100 bases:
>100_bases AAAACAAAAATAAAAAATAATTTGCATTAAAAATTAAACTCAATCAAATTATTTTTAACAAACGAAAATTTATTTTTATA AAATTAGCACTCAATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MIDKQKIKQLIQNPVYGFFDEFKKNLNSDLDHVILEQLKDQDNNIDKINHLVTDINNLKNDIKQRKKDEKIKQRTFCNIL IAVCFVIIIGLFFLHFYLKNSKFIKNFKKYEIEKNNQINICNSQKNKYIYNVLSQINSYKISQEIFAKNGLYLMPEIQYE NIKQTDLLISRNAKFVGFFGGLEVKFKSTDTFLVYYKEFSIKDVVTSGCIQISYRKGDQMVSETIVAHHKEPTPFVDLHS NFVHKTNYSPNFNFSTYAQTVNSRSKTIFSNLEFSKYYGLGIATQNLEFDTKMLEFFTPFSQENYENFAKYLKQDDITVP MFTKTATSLIIDDQLLKDNRKPFFINLLTNNSYVKTCDFLIDTDINADLQTNLNILKYELVKLFEKYILYLTTTSLSSVI AREWYINNDTYKIGDNYDYESYYYTNQNQLTPLSVSTKLFLKNQIAFVNDCEVIPFAELVNNQTRFGINKAQFNIKSYHV YNRVDNVPVYAHGRTHIVPVQYKEYIEYEYPFICLYVLKYKQLTEEIGLKYFTRPFNNILLTNFEDHSACSIDEILDFND NESKNNSDNDFKIYLKELDTIVTNANLNKNEFSFLKDNDGYFITISNKIELDEETEQELSTWLRKVSL
Sequences:
>Translated_628_residues MIDKQKIKQLIQNPVYGFFDEFKKNLNSDLDHVILEQLKDQDNNIDKINHLVTDINNLKNDIKQRKKDEKIKQRTFCNIL IAVCFVIIIGLFFLHFYLKNSKFIKNFKKYEIEKNNQINICNSQKNKYIYNVLSQINSYKISQEIFAKNGLYLMPEIQYE NIKQTDLLISRNAKFVGFFGGLEVKFKSTDTFLVYYKEFSIKDVVTSGCIQISYRKGDQMVSETIVAHHKEPTPFVDLHS NFVHKTNYSPNFNFSTYAQTVNSRSKTIFSNLEFSKYYGLGIATQNLEFDTKMLEFFTPFSQENYENFAKYLKQDDITVP MFTKTATSLIIDDQLLKDNRKPFFINLLTNNSYVKTCDFLIDTDINADLQTNLNILKYELVKLFEKYILYLTTTSLSSVI ARE*YINNDTYKIGDNYDYESYYYTNQNQLTPLSVSTKLFLKNQIAFVNDCEVIPFAELVNNQTRFGINKAQFNIKSYHV YNRVDNVPVYAHGRTHIVPVQYKEYIEYEYPFICLYVLKYKQLTEEIGLKYFTRPFNNILLTNFEDHSACSIDEILDFND NESKNNSDNDFKIYLKELDTIVTNANLNKNEFSFLKDNDGYFITISNKIELDEETEQELST*LRKVSL >Mature_628_residues MIDKQKIKQLIQNPVYGFFDEFKKNLNSDLDHVILEQLKDQDNNIDKINHLVTDINNLKNDIKQRKKDEKIKQRTFCNIL IAVCFVIIIGLFFLHFYLKNSKFIKNFKKYEIEKNNQINICNSQKNKYIYNVLSQINSYKISQEIFAKNGLYLMPEIQYE NIKQTDLLISRNAKFVGFFGGLEVKFKSTDTFLVYYKEFSIKDVVTSGCIQISYRKGDQMVSETIVAHHKEPTPFVDLHS NFVHKTNYSPNFNFSTYAQTVNSRSKTIFSNLEFSKYYGLGIATQNLEFDTKMLEFFTPFSQENYENFAKYLKQDDITVP MFTKTATSLIIDDQLLKDNRKPFFINLLTNNSYVKTCDFLIDTDINADLQTNLNILKYELVKLFEKYILYLTTTSLSSVI ARE*YINNDTYKIGDNYDYESYYYTNQNQLTPLSVSTKLFLKNQIAFVNDCEVIPFAELVNNQTRFGINKAQFNIKSYHV YNRVDNVPVYAHGRTHIVPVQYKEYIEYEYPFICLYVLKYKQLTEEIGLKYFTRPFNNILLTNFEDHSACSIDEILDFND NESKNNSDNDFKIYLKELDTIVTNANLNKNEFSFLKDNDGYFITISNKIELDEETEQELST*LRKVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73640; Mature: 73640
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKQKIKQLIQNPVYGFFDEFKKNLNSDLDHVILEQLKDQDNNIDKINHLVTDINNLKN CCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DIKQRKKDEKIKQRTFCNILIAVCFVIIIGLFFLHFYLKNSKFIKNFKKYEIEKNNQINI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCEEEE CNSQKNKYIYNVLSQINSYKISQEIFAKNGLYLMPEIQYENIKQTDLLISRNAKFVGFFG ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEECCCCEEEEEC GLEVKFKSTDTFLVYYKEFSIKDVVTSGCIQISYRKGDQMVSETIVAHHKEPTPFVDLHS CEEEEEECCCEEEEEEECCCHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCC NFVHKTNYSPNFNFSTYAQTVNSRSKTIFSNLEFSKYYGLGIATQNLEFDTKMLEFFTPF CEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHEECCEEEECCCCHHHHHHHHHCCC SQENYENFAKYLKQDDITVPMFTKTATSLIIDDQLLKDNRKPFFINLLTNNSYVKTCDFL CCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHHHHCCCCCEEEEEEECCCEEEEEEEE IDTDINADLQTNLNILKYELVKLFEKYILYLTTTSLSSVIAREYINNDTYKIGDNYDYES EECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC YYYTNQNQLTPLSVSTKLFLKNQIAFVNDCEVIPFAELVNNQTRFGINKAQFNIKSYHVY EEEECCCCCCEEECCEEEEEECCEEEECCCCCCCHHHHHCCCHHCCCCHHEEEEEEEEEE NRVDNVPVYAHGRTHIVPVQYKEYIEYEYPFICLYVLKYKQLTEEIGLKYFTRPFNNILL CCCCCCEEEECCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEE TNFEDHSACSIDEILDFNDNESKNNSDNDFKIYLKELDTIVTNANLNKNEFSFLKDNDGY ECCCCCCCCCHHHHHCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCCCCCCCEEECCCCE FITISNKIELDEETEQELSTLRKVSL EEEECCEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MIDKQKIKQLIQNPVYGFFDEFKKNLNSDLDHVILEQLKDQDNNIDKINHLVTDINNLKN CCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DIKQRKKDEKIKQRTFCNILIAVCFVIIIGLFFLHFYLKNSKFIKNFKKYEIEKNNQINI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCEEEE CNSQKNKYIYNVLSQINSYKISQEIFAKNGLYLMPEIQYENIKQTDLLISRNAKFVGFFG ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEECCCCEEEEEC GLEVKFKSTDTFLVYYKEFSIKDVVTSGCIQISYRKGDQMVSETIVAHHKEPTPFVDLHS CEEEEEECCCEEEEEEECCCHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCC NFVHKTNYSPNFNFSTYAQTVNSRSKTIFSNLEFSKYYGLGIATQNLEFDTKMLEFFTPF CEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHEECCEEEECCCCHHHHHHHHHCCC SQENYENFAKYLKQDDITVPMFTKTATSLIIDDQLLKDNRKPFFINLLTNNSYVKTCDFL CCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHHHHCCCCCEEEEEEECCCEEEEEEEE IDTDINADLQTNLNILKYELVKLFEKYILYLTTTSLSSVIAREYINNDTYKIGDNYDYES EECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC YYYTNQNQLTPLSVSTKLFLKNQIAFVNDCEVIPFAELVNNQTRFGINKAQFNIKSYHVY EEEECCCCCCEEECCEEEEEECCEEEECCCCCCCHHHHHCCCHHCCCCHHEEEEEEEEEE NRVDNVPVYAHGRTHIVPVQYKEYIEYEYPFICLYVLKYKQLTEEIGLKYFTRPFNNILL CCCCCCEEEECCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEE TNFEDHSACSIDEILDFNDNESKNNSDNDFKIYLKELDTIVTNANLNKNEFSFLKDNDGY ECCCCCCCCCHHHHHCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCCCCCCCEEECCCCE FITISNKIELDEETEQELSTLRKVSL EEEECCEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA