Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357863

GI number: 13357863

Start: 343161

End: 343661

Strand: Direct

Name: Not Available

Synonym: UU303

Alternate gene names: NA

Gene position: 343161-343661 (Clockwise)

Preceding gene: 13357862

Following gene: 13357864

Centisome position: 45.65

GC content: 24.95

Gene sequence:

>501_bases
TTGCAAGAAGGAGATTTTTATGCGACAGATAGAGACCCTTTTTTAACATATTGAAAAGAATTAAAACCAAGTTTTTATGC
AAAAAAAAGTGTTTATATTGCATTTTTAACTATTATAATTGCTTTTGCTGTTAGCATCATTGGTTTTGTAAATTATTTTT
CATTAAAAATTGCCTTAGAACAAACACAAAAAGCCACTTTAGAAGTTCAAAAACAAAAAGAAGAACAAAAAAATCAATTA
TCAAATGGTGTATATTTTGATCAGGATTTAAATTTATTAAATGAGTATGATAAATTAGTTTTATATCAAAAAAATAATTT
ATCAAGTATAGTCTTTTTAGCGATTAATGACCAAGAACAAATTTTGATGCAAAAAGATCAGGTTGTAGTTAATTCTCTAA
ATATTGAACAAAAAGTTAAATATCGTGAACAAGCAACACGAATTGTTTTTGAGAAACAAGCTGAACATAATGATCATCTA
GTAACTTCTGGAAATTTCTAA

Upstream 100 bases:

>100_bases
TACCACTCTTTATTTAGTAGGATCCTTAATTATTATTAGTTGAATTCTTAGTTACATTGCTATTGGTATCAACTTTCGTC
CTAATAATTTTAATGTTACG

Downstream 100 bases:

>100_bases
ATTAATTTAATCTTAATAAAATCTCAAAAGTGGTCTAAACCACTTTTTTGTTTTATTTTTAAACAAAAAACTTGATATTT
ATTATTTTTTTGATTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQEGDFYATDRDPFLTYWKELKPSFYAKKSVYIAFLTIIIAFAVSIIGFVNYFSLKIALEQTQKATLEVQKQKEEQKNQL
SNGVYFDQDLNLLNEYDKLVLYQKNNLSSIVFLAINDQEQILMQKDQVVVNSLNIEQKVKYREQATRIVFEKQAEHNDHL
VTSGNF

Sequences:

>Translated_166_residues
MQEGDFYATDRDPFLTY*KELKPSFYAKKSVYIAFLTIIIAFAVSIIGFVNYFSLKIALEQTQKATLEVQKQKEEQKNQL
SNGVYFDQDLNLLNEYDKLVLYQKNNLSSIVFLAINDQEQILMQKDQVVVNSLNIEQKVKYREQATRIVFEKQAEHNDHL
VTSGNF
>Mature_166_residues
MQEGDFYATDRDPFLTY*KELKPSFYAKKSVYIAFLTIIIAFAVSIIGFVNYFSLKIALEQTQKATLEVQKQKEEQKNQL
SNGVYFDQDLNLLNEYDKLVLYQKNNLSSIVFLAINDQEQILMQKDQVVVNSLNIEQKVKYREQATRIVFEKQAEHNDHL
VTSGNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19215; Mature: 19215

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEGDFYATDRDPFLTYKELKPSFYAKKSVYIAFLTIIIAFAVSIIGFVNYFSLKIALEQ
CCCCCEEECCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
TQKATLEVQKQKEEQKNQLSNGVYFDQDLNLLNEYDKLVLYQKNNLSSIVFLAINDQEQI
HHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHH
LMQKDQVVVNSLNIEQKVKYREQATRIVFEKQAEHNDHLVTSGNF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
>Mature Secondary Structure
MQEGDFYATDRDPFLTYKELKPSFYAKKSVYIAFLTIIIAFAVSIIGFVNYFSLKIALEQ
CCCCCEEECCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
TQKATLEVQKQKEEQKNQLSNGVYFDQDLNLLNEYDKLVLYQKNNLSSIVFLAINDQEQI
HHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHH
LMQKDQVVVNSLNIEQKVKYREQATRIVFEKQAEHNDHLVTSGNF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA