Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357862

GI number: 13357862

Start: 342715

End: 343077

Strand: Direct

Name: Not Available

Synonym: UU302

Alternate gene names: NA

Gene position: 342715-343077 (Clockwise)

Preceding gene: 13357861

Following gene: 13357863

Centisome position: 45.59

GC content: 23.14

Gene sequence:

>363_bases
ATGAAGCAACGATTAATAAATTATATTATTGTTTTAATTGGTATTTTATGTATTGTTAGTCTTGTCGTTGGTTTTGCCGT
TTGATTTAGCCCTAATAAAAATTTTGATACGTTAACTCAAAACAAAATTGATGGTAATGAAGTTAAAAGATTATATAACC
CAAACAATGGCATTTTTTTAGAACAATTAGAAGGGTTTAGTAAATATAATATTGCTGGTTATGTGGTTCCAATTGTTTTT
GTTATTTTATCATTTATTTTATTATTTTTATATTATTTTTTAAATAAAAAATCACGATCTAAAGCTGATTTTCCTATTAG
TGAAAAATTTATTATCACACTTCAATTACCACTCTTTATTTAG

Upstream 100 bases:

>100_bases
TGACAAAAACTATTTTAAGATCAGAAACTGCAAGTCTTTATTTACTTGCAAATCTTGTTAATAAGCTTATTTAGTTTTAT
TTAAGAAAGGAAAAAAAAGT

Downstream 100 bases:

>100_bases
TAGGATCCTTAATTATTATTAGTTGAATTCTTAGTTACATTGCTATTGGTATCAACTTTCGTCCTAATAATTTTAATGTT
ACGTTGCAAGAAGGAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKQRLINYIIVLIGILCIVSLVVGFAVWFSPNKNFDTLTQNKIDGNEVKRLYNPNNGIFLEQLEGFSKYNIAGYVVPIVF
VILSFILLFLYYFLNKKSRSKADFPISEKFIITLQLPLFI

Sequences:

>Translated_120_residues
MKQRLINYIIVLIGILCIVSLVVGFAV*FSPNKNFDTLTQNKIDGNEVKRLYNPNNGIFLEQLEGFSKYNIAGYVVPIVF
VILSFILLFLYYFLNKKSRSKADFPISEKFIITLQLPLFI
>Mature_120_residues
MKQRLINYIIVLIGILCIVSLVVGFAV*FSPNKNFDTLTQNKIDGNEVKRLYNPNNGIFLEQLEGFSKYNIAGYVVPIVF
VILSFILLFLYYFLNKKSRSKADFPISEKFIITLQLPLFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13684; Mature: 13684

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRLINYIIVLIGILCIVSLVVGFAVFSPNKNFDTLTQNKIDGNEVKRLYNPNNGIFLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHH
QLEGFSKYNIAGYVVPIVFVILSFILLFLYYFLNKKSRSKADFPISEKFIITLQLPLFI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKQRLINYIIVLIGILCIVSLVVGFAVFSPNKNFDTLTQNKIDGNEVKRLYNPNNGIFLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHH
QLEGFSKYNIAGYVVPIVFVILSFILLFLYYFLNKKSRSKADFPISEKFIITLQLPLFI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA