| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357835
GI number: 13357835
Start: 310489
End: 311034
Strand: Direct
Name: Not Available
Synonym: UU275
Alternate gene names: NA
Gene position: 310489-311034 (Clockwise)
Preceding gene: 13357833
Following gene: 13357836
Centisome position: 41.3
GC content: 26.56
Gene sequence:
>546_bases ATGGGATTAAAAAAAGAAAAAAAAGATCGTTCAACGATTCAATTATTATTTGGAACAATTAAAAAACGCAAAATTGCGAA CTATTTAATTATTGCTTTTGCCTTTTTAACATTTGCCTTAGCAATTATAGGAAGTTTTGAAGCTATTGCATCAAAATATG CTATTGGCATTGGATCAGGGCTTTCATTATTTATTACGATTGCTTTTAGTGTTTGACGAATTTTAATGATTCATTTAGAA AAAGAATGAAATAAAAGTGAAATTATTTGACAATCCGTTATGGGCGCAATTTTAGTATTATCAATTATTTTTTGAATATG AGCAACAACTACAACAACTATACAATATTCATCACTAAAAGAACATCTTTTATTGTTAAAACAACAAGATTCACGCGCTA ATTTTGTTGTTTTAACACAAGCAACAGTGGATGAATTTGGAGTTGCTTTAAAAGGCGGGTTATGAGCTTGAGTTATTACA AGTTGTATTTATATTTTTATCAATACTTTTAATAATATGTTTATGAAAGAAAAAAATTCAAAATAA
Upstream 100 bases:
>100_bases TATCAAACTTGTTATAATTAATAATTATATTATTACTTATCATAAATAAAAATAATTTATTTATATTCTAGGTATCTTGG AGGATTTAAAAGTTAGAATT
Downstream 100 bases:
>100_bases TTATGGGACCAATTATTCCAAATACACGTTTAATTGATTTTAAATTTGATCGAGACTTATTAAATAGTGCCTATACTGCT CATTATTTTATTAAAACATG
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGLKKEKKDRSTIQLLFGTIKKRKIANYLIIAFAFLTFALAIIGSFEAIASKYAIGIGSGLSLFITIAFSVWRILMIHLE KEWNKSEIIWQSVMGAILVLSIIFWIWATTTTTIQYSSLKEHLLLLKQQDSRANFVVLTQATVDEFGVALKGGLWAWVIT SCIYIFINTFNNMFMKEKNSK
Sequences:
>Translated_181_residues MGLKKEKKDRSTIQLLFGTIKKRKIANYLIIAFAFLTFALAIIGSFEAIASKYAIGIGSGLSLFITIAFSV*RILMIHLE KE*NKSEII*QSVMGAILVLSIIF*I*ATTTTTIQYSSLKEHLLLLKQQDSRANFVVLTQATVDEFGVALKGGL*A*VIT SCIYIFINTFNNMFMKEKNSK >Mature_180_residues GLKKEKKDRSTIQLLFGTIKKRKIANYLIIAFAFLTFALAIIGSFEAIASKYAIGIGSGLSLFITIAFSV*RILMIHLEK E*NKSEII*QSVMGAILVLSIIF*I*ATTTTTIQYSSLKEHLLLLKQQDSRANFVVLTQATVDEFGVALKGGL*A*VITS CIYIFINTFNNMFMKEKNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19168; Mature: 19037
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKKEKKDRSTIQLLFGTIKKRKIANYLIIAFAFLTFALAIIGSFEAIASKYAIGIGSG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSLFITIAFSVRILMIHLEKENKSEIIQSVMGAILVLSIIFIATTTTTIQYSSLKEHLLL HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHH LKQQDSRANFVVLTQATVDEFGVALKGGLAVITSCIYIFINTFNNMFMKEKNSK HHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLKKEKKDRSTIQLLFGTIKKRKIANYLIIAFAFLTFALAIIGSFEAIASKYAIGIGSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSLFITIAFSVRILMIHLEKENKSEIIQSVMGAILVLSIIFIATTTTTIQYSSLKEHLLL HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHH LKQQDSRANFVVLTQATVDEFGVALKGGLAVITSCIYIFINTFNNMFMKEKNSK HHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA