| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357829
GI number: 13357829
Start: 304806
End: 305480
Strand: Direct
Name: Not Available
Synonym: UU269
Alternate gene names: 13357829
Gene position: 304806-305480 (Clockwise)
Preceding gene: 13357828
Following gene: 13357830
Centisome position: 40.55
GC content: 24.3
Gene sequence:
>675_bases ATGCGTTTACGAAATAATGCCAATGCTCCACTTTATTTAAAATCACAACACGAATATATAATTAATGATCCACACCTTTT AAAAGATAATTTAGGAAAAATTTTTAAAAATCCTGAATTGCCTCTTTATATTGAAATTGGAATGGGTAAGGGTGATTTTA TTATTGAAAATGCCTTACGAAACCAACAAATTAATTATTTAGGTATTGAAAAATTTCCAACAGTAATTGTTAAAGCTCAC AAAAAAGCTTTAAAACATAAATTAGATAATTTAGCAATGATTTGTTTTGACGCAAATAAAATTTTAGAATTATTAAATTC TGAAAGTGTAGATAAAATTTATTTAAATTTTTCTGACCCCTGACCTAAAAAACGTCATGCAAAAAAACGACTGACACATC CGTGTTTTTTAGAGAAGTTTGCAGTTATTTTAAAACAAAATGCTCTTGTTGAATTTAAAACAGATAATGAAAATTTATTT ATGTATACTATTTATGATGTATTGCTAAAGGATTTAACAAAGTATGAAATTTTATTTTTAACTTATAATTTATACACACT TGTTAACAATGTTGAATTATTAAAAAATATTCCTACCGAATATGAAAAAAAATTTGTTATGCAGGGCGAGCGTATTAAAA AAGTCAATTTTCGTTTTCTTAAAAATAATCAATAA
Upstream 100 bases:
>100_bases TTGCTAATAGTGTTGCTATGGGAATCTATGAAGTAGTGCGGCAAAATAATTTTAAAGATTTATTCAAATATGAACCTCAT AAGAAATTTGAGTAATTTTT
Downstream 100 bases:
>100_bases AAAGATAACTATAATGTTATAATTATATGGTTATATGGCGGTTATGGTGAAGTTGGTTAACACGCCTGATTGTGGCTCAG GTATTTTCGCGGGTTCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRLRNNANAPLYLKSQHEYIINDPHLLKDNLGKIFKNPELPLYIEIGMGKGDFIIENALRNQQINYLGIEKFPTVIVKAH KKALKHKLDNLAMICFDANKILELLNSESVDKIYLNFSDPWPKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNENLF MYTIYDVLLKDLTKYEILFLTYNLYTLVNNVELLKNIPTEYEKKFVMQGERIKKVNFRFLKNNQ
Sequences:
>Translated_224_residues MRLRNNANAPLYLKSQHEYIINDPHLLKDNLGKIFKNPELPLYIEIGMGKGDFIIENALRNQQINYLGIEKFPTVIVKAH KKALKHKLDNLAMICFDANKILELLNSESVDKIYLNFSDP*PKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNENLF MYTIYDVLLKDLTKYEILFLTYNLYTLVNNVELLKNIPTEYEKKFVMQGERIKKVNFRFLKNNQ >Mature_224_residues MRLRNNANAPLYLKSQHEYIINDPHLLKDNLGKIFKNPELPLYIEIGMGKGDFIIENALRNQQINYLGIEKFPTVIVKAH KKALKHKLDNLAMICFDANKILELLNSESVDKIYLNFSDP*PKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNENLF MYTIYDVLLKDLTKYEILFLTYNLYTLVNNVELLKNIPTEYEKKFVMQGERIKKVNFRFLKNNQ
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4 [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 26290; Mature: 26290
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRNNANAPLYLKSQHEYIINDPHLLKDNLGKIFKNPELPLYIEIGMGKGDFIIENALR CCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH NQQINYLGIEKFPTVIVKAHKKALKHKLDNLAMICFDANKILELLNSESVDKIYLNFSDP CCCCCEECHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCCEEEEEECCCC PKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNENLFMYTIYDVLLKDLTKYEILFLT CHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHEEEEEEE YNLYTLVNNVELLKNIPTEYEKKFVMQGERIKKVNFRFLKNNQ EHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCC >Mature Secondary Structure MRLRNNANAPLYLKSQHEYIINDPHLLKDNLGKIFKNPELPLYIEIGMGKGDFIIENALR CCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHH NQQINYLGIEKFPTVIVKAHKKALKHKLDNLAMICFDANKILELLNSESVDKIYLNFSDP CCCCCEECHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCCEEEEEECCCC PKKRHAKKRLTHPCFLEKFAVILKQNALVEFKTDNENLFMYTIYDVLLKDLTKYEILFLT CHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHEEEEEEE YNLYTLVNNVELLKNIPTEYEKKFVMQGERIKKVNFRFLKNNQ EHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA