Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357770

GI number: 13357770

Start: 255184

End: 255492

Strand: Reverse

Name: Not Available

Synonym: UU211

Alternate gene names: NA

Gene position: 255492-255184 (Counterclockwise)

Preceding gene: 13357771

Following gene: 13357769

Centisome position: 33.99

GC content: 24.6

Gene sequence:

>309_bases
ATGATTAAAATAAATCATTATCCAAACGCTTTATTAGTAAAAGGTCATGCAAATTTTGATGAGCATGGCAAAGATATAGT
ATGCGCTGGAGTGAGTGCTATTATTATGGGTGCACTTAATTGATTTGATCAACAAAAAACAACAATTAAGGTTGAGCAAG
GATTTATATTAATAATTATTGATAATAACAATCAATTGTATCGTCAATATCTAGAATTAATTATAATTCAATTAAAAGCA
ATCTATTTTAAATATCAATCTTATATTGAATTACACGAATATAAACAACAATATAAAAGAGGTTTATAA

Upstream 100 bases:

>100_bases
TTATTAAATTTAAATCTAAAAAACACCATTTAAAACGTCAAGGTCATCGACAACCATATACACAATTAGTTATTGATTCA
ATTAGTGTTAAGTAGTTTTT

Downstream 100 bases:

>100_bases
TTACAATGAATAAATTATACTGATTAACTGACTTACAACTTTTTGCTTCTAAAAAAGGGGTAGGTTCATCTAAAAATGGT
CGTGACTCAAATCCTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MIKINHYPNALLVKGHANFDEHGKDIVCAGVSAIIMGALNWFDQQKTTIKVEQGFILIIIDNNNQLYRQYLELIIIQLKA
IYFKYQSYIELHEYKQQYKRGL

Sequences:

>Translated_102_residues
MIKINHYPNALLVKGHANFDEHGKDIVCAGVSAIIMGALN*FDQQKTTIKVEQGFILIIIDNNNQLYRQYLELIIIQLKA
IYFKYQSYIELHEYKQQYKRGL
>Mature_102_residues
MIKINHYPNALLVKGHANFDEHGKDIVCAGVSAIIMGALN*FDQQKTTIKVEQGFILIIIDNNNQLYRQYLELIIIQLKA
IYFKYQSYIELHEYKQQYKRGL

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11800; Mature: 11800

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKINHYPNALLVKGHANFDEHGKDIVCAGVSAIIMGALNFDQQKTTIKVEQGFILIIID
CEEECCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEE
NNNQLYRQYLELIIIQLKAIYFKYQSYIELHEYKQQYKRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKINHYPNALLVKGHANFDEHGKDIVCAGVSAIIMGALNFDQQKTTIKVEQGFILIIID
CEEECCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEE
NNNQLYRQYLELIIIQLKAIYFKYQSYIELHEYKQQYKRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA