| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357767
GI number: 13357767
Start: 253523
End: 254161
Strand: Reverse
Name: Not Available
Synonym: UU209
Alternate gene names: NA
Gene position: 254161-253523 (Counterclockwise)
Preceding gene: 13357769
Following gene: 13357766
Centisome position: 33.81
GC content: 18.15
Gene sequence:
>639_bases ATGAATATCAACTGAAAAAGTATGTATAAAGAGATTTTAATAAGAAATAGTGATTTAAATTATATTGTTAGTGATCCTTT TGAAAACATGATTGGAGGTTTTCCTATTATTTTATTTGAAAATGATAATTATATATATTATTTATCTGGTCAAAATGCTT ATTTACCTTCAAAAATGCGTCGTTGAAAAAACTGAGATGAAATTTTGATCAATAAAAATGACTTATTAAAAGAAAATTTT ATTTATAAGGATATTTATATTAATTTATTTCAAATCTATGTTACTAAAAAAAATAATTTAAGCAGATATTTAAGTAACCA GTTTAATTTTACGTTAACAAAAAACGATTTTAAAGACGAATTGTGAAATAAATTAATATATAATACAATAAAAAAATTGA TTAATAATTCCAATCCACAAATTTTACTATTTGAAATTTCAAGAAATAAAAAGCAAAAATATCATAGTTTATTACTTTTT GCTGATAAAAATGTATTGAAAAAATTTTATTTAAATTCTGCAACAAAAGATAATTATGAAGATATTATTGATTTGGCCTT TAATAAATTTGAAAATTTACAAAATTTATTAAAAACAACAAAAGTTAAAAACCATTTAAAAAATTTGAAAAAGTATTAA
Upstream 100 bases:
>100_bases CATCTTTTTAAACACCTCCACGTGTTAAAATTATTTAAATATTTTAATTTCACTAATTTTAATATTATAAAATATTTATA GTAATATAATAAATTTTTTT
Downstream 100 bases:
>100_bases GATTGTATTTATCTTATTTGTCTAAAAACATAAATAATAATTTTATAATATAATATAATTTTGAAACTATAAATATGAGA GCGTAAATGTGGTGGGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNINWKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRRWKNWDEILINKNDLLKENF IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELWNKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY
Sequences:
>Translated_212_residues MNIN*KSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR*KN*DEILINKNDLLKENF IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDEL*NKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY >Mature_212_residues MNIN*KSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR*KN*DEILINKNDLLKENF IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDEL*NKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24890; Mature: 24890
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR CCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHC KNDEILINKNDLLKENFIYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELNK CCCCEEECCCHHHHHHCCHHHHHEEEEEEEEECCCCHHHHHCCCCEEEEECCHHHHHHHH LIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLFADKNVLKKFYLNSATKDNYEDIID HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEEEECHHHHHHHHHCCCCCCCHHHHHH LAFNKFENLQNLLKTTKVKNHLKNLKKY HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNINKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR CCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHC KNDEILINKNDLLKENFIYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELNK CCCCEEECCCHHHHHHCCHHHHHEEEEEEEEECCCCHHHHHCCCCEEEEECCHHHHHHHH LIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLFADKNVLKKFYLNSATKDNYEDIID HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEEEECHHHHHHHHHCCCCCCCHHHHHH LAFNKFENLQNLLKTTKVKNHLKNLKKY HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA