| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357765
GI number: 13357765
Start: 251443
End: 253137
Strand: Reverse
Name: Not Available
Synonym: UU207
Alternate gene names: NA
Gene position: 253137-251443 (Counterclockwise)
Preceding gene: 13357766
Following gene: 13357764
Centisome position: 33.67
GC content: 27.2
Gene sequence:
>1695_bases ATGAAAACAATTAAGTTAGATCTTTTTCAAAAAATGTTATATGCAGGTGCAAAAATATTAGAAATTGAATGTGAATATAT TAACGATTTAAATGTTTTTCCTGTTCCAGATGGTGATACTGGTTCAAACATGAAAACCACAACAGCTGGTGCAATTATTG CTATTAAAGAGATAGAAATATCCAATTTTTCCCAACTTGCTAAAATTTTTAGTCGTGGTCTATTAATGAACGCCAGAGGT AACTCTGGTGTTATTTTAAGTCAAATATTTCGTGGATTTATGGATGCTTTAAATAACGATGCTTATGAAGTTAGTATTGA ACAATTAAAACAAGCTTTTAATGGTGCAAAAGAAAAAGCTTATGCAAGCGTCTCTACACCTATTGAAGGAACAATTTTAA CAGTCATTCGCGTTATTAATGAGCGAATAAGTGAACGTCAAAATTTTGATAGTGTCGAAGATTTATTTGCATTTGTTACA AAAGAAGCGCAAATCATTCTAGAAAGAACACCAGAAATGTTACCTTCGCTAAAAGAAGCTAATGTTGTTGATTCTGGTGG ATATGGTTTAGTAAGTTTTCTAAAAGGAATGTATCAAAGCTTAACAAATACATTTGATGAAAAATTAATTATTAAAAACG AAGAAGAAAATATTAAATCAAAGACTAAACCGCTTGATCTTGAAATTATACATAAAGAAAAAGAAGAAGGTTTTGGTTAT TGTAGTGAAATTATTTTATCTTTACGAAAAAAAATTATCCCTAATTCACCAAGTAAAAGTTTTTTTGAATTTGAAAAATA TAAAAGTGAATTAGCAAAAATCGGTGATAGTATTGTAGCAATCCAAGATGAAGATCTAGTTAAAGTTCATTTGCATACCC TAACTCCTTATAAATTCTTACAATTATCACAAAAATATGGTGAATTTGATAAGATTAAAATTGAAAACATGACAAACCAA TTTTATGAAAGTTTAGAACGAAAAGGGTTGACTACAAAAAAAGAAAATAAATTGACTTTAAGTATGGAGCAAAAAATTAT TGCAACAGTTCCATCTGAAAAGTTTAAAAAAATGTTTATTGAAGAACATGGTATTGATAATGTTATTGTTACTGAAACAG AAGGAGCTCCATCAATTCAACGTTTTGTCGATGAAATTAACTCAACAAACTCTTCACAAATTTTTATTGTCACTGATGAT TCAAATATTGTATTAGCTGCTGAACAAGCTTCAAAAATCGTTGCTGAAAACAACATTTTGGTTTCTGTAATTGGAGCTTA TAATGTTTTTGAAACGCTTTTAGCGATTTCTCATTTTGAACAGCAAAATGATTATCGCACAAATTTTAAAACAATGAATA AAATAGTTAAAAAAGCACGTAGTGGGATGATTACTACTTCAATTAAAAATGTTAAATATCCACATATTACTGTTAATAAA GATGATTATATAGGCATTATTAATAAAAAAATTATCGCTTCTGAAAAAAATGCTTATGATGTTTTATTAAAAACAATTGA AATGTTAATTGAAAGTTTAAAAAAACCAGAAATTTGTTATATATATTATGGCATTAATGCTTCACAAACAGATGTACATC AAATTGAAAAATACATTTCAGAAAAATATGGAATTATTTGTGATTTAAGATATACTGGTCAAAGTTTATATCATTACTAC ATAGGAATTCAATAA
Upstream 100 bases:
>100_bases ATGAAGCGCGTAATTTAGTATATTATGAATTGTCAAAACAATTAAATGATGATAATGTGGTTATTAACATCATTATAAAC TGTTAAAATGGAAGTGTGAT
Downstream 100 bases:
>100_bases TATTATGGAAAAAATTAAAATTTTATTAGATACAATGGGTTATGAAAATGATTTAGAACATGTAATTAAAGCAGCTAAAG ATTTTTATTATCAACATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY IGIQ
Sequences:
>Translated_564_residues MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY IGIQ >Mature_564_residues MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY IGIQ
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 64014; Mature: 64014
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEI CCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEEEECC SNFSQLAKIFSRGLLMNARGNSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKA CCHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH YASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVTKEAQIILERTPEMLPSLKEA HEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHC NVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCEEEEECCHHCCCCH CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHH QLSQKYGEFDKIKIENMTNQFYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFI HHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEECCHHHHHHHHH EEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDDSNIVLAAEQASKIVAENNIL HHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHHHCCCCEE VSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYIS CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH EKYGIICDLRYTGQSLYHYYIGIQ HCCCEEEEEEECCCEEEEEEEECC >Mature Secondary Structure MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEI CCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEEEECC SNFSQLAKIFSRGLLMNARGNSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKA CCHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH YASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVTKEAQIILERTPEMLPSLKEA HEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHC NVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCEEEEECCHHCCCCH CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHH QLSQKYGEFDKIKIENMTNQFYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFI HHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEECCHHHHHHHHH EEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDDSNIVLAAEQASKIVAENNIL HHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHHHCCCCEE VSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYIS CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH EKYGIICDLRYTGQSLYHYYIGIQ HCCCEEEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]