Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357765

GI number: 13357765

Start: 251443

End: 253137

Strand: Reverse

Name: Not Available

Synonym: UU207

Alternate gene names: NA

Gene position: 253137-251443 (Counterclockwise)

Preceding gene: 13357766

Following gene: 13357764

Centisome position: 33.67

GC content: 27.2

Gene sequence:

>1695_bases
ATGAAAACAATTAAGTTAGATCTTTTTCAAAAAATGTTATATGCAGGTGCAAAAATATTAGAAATTGAATGTGAATATAT
TAACGATTTAAATGTTTTTCCTGTTCCAGATGGTGATACTGGTTCAAACATGAAAACCACAACAGCTGGTGCAATTATTG
CTATTAAAGAGATAGAAATATCCAATTTTTCCCAACTTGCTAAAATTTTTAGTCGTGGTCTATTAATGAACGCCAGAGGT
AACTCTGGTGTTATTTTAAGTCAAATATTTCGTGGATTTATGGATGCTTTAAATAACGATGCTTATGAAGTTAGTATTGA
ACAATTAAAACAAGCTTTTAATGGTGCAAAAGAAAAAGCTTATGCAAGCGTCTCTACACCTATTGAAGGAACAATTTTAA
CAGTCATTCGCGTTATTAATGAGCGAATAAGTGAACGTCAAAATTTTGATAGTGTCGAAGATTTATTTGCATTTGTTACA
AAAGAAGCGCAAATCATTCTAGAAAGAACACCAGAAATGTTACCTTCGCTAAAAGAAGCTAATGTTGTTGATTCTGGTGG
ATATGGTTTAGTAAGTTTTCTAAAAGGAATGTATCAAAGCTTAACAAATACATTTGATGAAAAATTAATTATTAAAAACG
AAGAAGAAAATATTAAATCAAAGACTAAACCGCTTGATCTTGAAATTATACATAAAGAAAAAGAAGAAGGTTTTGGTTAT
TGTAGTGAAATTATTTTATCTTTACGAAAAAAAATTATCCCTAATTCACCAAGTAAAAGTTTTTTTGAATTTGAAAAATA
TAAAAGTGAATTAGCAAAAATCGGTGATAGTATTGTAGCAATCCAAGATGAAGATCTAGTTAAAGTTCATTTGCATACCC
TAACTCCTTATAAATTCTTACAATTATCACAAAAATATGGTGAATTTGATAAGATTAAAATTGAAAACATGACAAACCAA
TTTTATGAAAGTTTAGAACGAAAAGGGTTGACTACAAAAAAAGAAAATAAATTGACTTTAAGTATGGAGCAAAAAATTAT
TGCAACAGTTCCATCTGAAAAGTTTAAAAAAATGTTTATTGAAGAACATGGTATTGATAATGTTATTGTTACTGAAACAG
AAGGAGCTCCATCAATTCAACGTTTTGTCGATGAAATTAACTCAACAAACTCTTCACAAATTTTTATTGTCACTGATGAT
TCAAATATTGTATTAGCTGCTGAACAAGCTTCAAAAATCGTTGCTGAAAACAACATTTTGGTTTCTGTAATTGGAGCTTA
TAATGTTTTTGAAACGCTTTTAGCGATTTCTCATTTTGAACAGCAAAATGATTATCGCACAAATTTTAAAACAATGAATA
AAATAGTTAAAAAAGCACGTAGTGGGATGATTACTACTTCAATTAAAAATGTTAAATATCCACATATTACTGTTAATAAA
GATGATTATATAGGCATTATTAATAAAAAAATTATCGCTTCTGAAAAAAATGCTTATGATGTTTTATTAAAAACAATTGA
AATGTTAATTGAAAGTTTAAAAAAACCAGAAATTTGTTATATATATTATGGCATTAATGCTTCACAAACAGATGTACATC
AAATTGAAAAATACATTTCAGAAAAATATGGAATTATTTGTGATTTAAGATATACTGGTCAAAGTTTATATCATTACTAC
ATAGGAATTCAATAA

Upstream 100 bases:

>100_bases
ATGAAGCGCGTAATTTAGTATATTATGAATTGTCAAAACAATTAAATGATGATAATGTGGTTATTAACATCATTATAAAC
TGTTAAAATGGAAGTGTGAT

Downstream 100 bases:

>100_bases
TATTATGGAAAAAATTAAAATTTTATTAGATACAATGGGTTATGAAAATGATTTAGAACATGTAATTAAAGCAGCTAAAG
ATTTTTATTATCAACATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG
NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT
KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY
CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ
FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD
SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK
DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY
IGIQ

Sequences:

>Translated_564_residues
MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG
NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT
KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY
CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ
FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD
SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK
DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY
IGIQ
>Mature_564_residues
MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEISNFSQLAKIFSRGLLMNARG
NSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKAYASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVT
KEAQIILERTPEMLPSLKEANVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY
CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFLQLSQKYGEFDKIKIENMTNQ
FYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFIEEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDD
SNIVLAAEQASKIVAENNILVSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK
DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYISEKYGIICDLRYTGQSLYHYY
IGIQ

Specific function: Unknown

COG id: COG1461

COG function: function code R; Predicted kinase related to dihydroxyacetone kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DhaL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004007
- InterPro:   IPR019986 [H]

Pfam domain/function: PF02734 Dak2 [H]

EC number: NA

Molecular weight: Translated: 64014; Mature: 64014

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEI
CCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEEEECC
SNFSQLAKIFSRGLLMNARGNSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKA
CCHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH
YASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVTKEAQIILERTPEMLPSLKEA
HEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHC
NVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCEEEEECCHHCCCCH
CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHH
QLSQKYGEFDKIKIENMTNQFYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFI
HHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEECCHHHHHHHHH
EEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDDSNIVLAAEQASKIVAENNIL
HHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHHHCCCCEE
VSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK
EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC
DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYIS
CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
EKYGIICDLRYTGQSLYHYYIGIQ
HCCCEEEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKTIKLDLFQKMLYAGAKILEIECEYINDLNVFPVPDGDTGSNMKTTTAGAIIAIKEIEI
CCEEHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEEEECC
SNFSQLAKIFSRGLLMNARGNSGVILSQIFRGFMDALNNDAYEVSIEQLKQAFNGAKEKA
CCHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH
YASVSTPIEGTILTVIRVINERISERQNFDSVEDLFAFVTKEAQIILERTPEMLPSLKEA
HEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHC
NVVDSGGYGLVSFLKGMYQSLTNTFDEKLIIKNEEENIKSKTKPLDLEIIHKEKEEGFGY
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCEEEEECCHHCCCCH
CSEIILSLRKKIIPNSPSKSFFEFEKYKSELAKIGDSIVAIQDEDLVKVHLHTLTPYKFL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHH
QLSQKYGEFDKIKIENMTNQFYESLERKGLTTKKENKLTLSMEQKIIATVPSEKFKKMFI
HHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEECCHHHHHHHHH
EEHGIDNVIVTETEGAPSIQRFVDEINSTNSSQIFIVTDDSNIVLAAEQASKIVAENNIL
HHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHHHCCCCEE
VSVIGAYNVFETLLAISHFEQQNDYRTNFKTMNKIVKKARSGMITTSIKNVKYPHITVNK
EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECC
DDYIGIINKKIIASEKNAYDVLLKTIEMLIESLKKPEICYIYYGINASQTDVHQIEKYIS
CCEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
EKYGIICDLRYTGQSLYHYYIGIQ
HCCCEEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]