Click here to switch to the map view.

The map label for this gene is hsdS-3

Identifier: 13357656

GI number: 13357656

Start: 125367

End: 126272

Strand: Direct

Name: hsdS-3

Synonym: UU099

Alternate gene names: NA

Gene position: 125367-126272 (Clockwise)

Preceding gene: 13357655

Following gene: 13357657

Centisome position: 16.68

GC content: 23.73

Gene sequence:

>906_bases
ATGAATAAAATTGAAAAATTAATTAATGAGTTCTGCCCTAATGGAGTGGAGTTTAAAAAATTAAAAAATATAATTACAGT
GGCTCCTAAATCACCTTTTGGAGTTACAAAACTTTTAAAAATGGAAAAGGGAAATTATTTAACAATAACATCAGGGAAGA
AATCATTTTATGTTGACAATTTTTTAGTTGATGGAGAATATATATTTGTTAATGATGGCGGTCAAGCAGATATAAAATAT
AATTTTGGAAAAACAATGTATTCTGATCATATATTCGCATTCAAAGTAAATGAATATAACACAAAATATCTTTACTTCTA
TCTATTAAATATTTCTAATTTTATTAATAAAAAATTGTTTATAGGTAGTACATTAAAAAATTTAAATAAAAAAGAATTTT
TAAATCTTGCAATCCCTATTCCGCCCATTTCAATCCAAAATAAAATTGTTGAAATATTAGACAAGTATACAGAATTAGAA
ACAGAATTAGAAACAGAATTAGAAACAGAATTAGAACTTAGAAATAAGCAGTATATATATTATCGCAATGAATTACTAAA
CTTTAATAAAAATCAAACATTATTAAAGAAAATAATGGACAGTGATGATATAAAATCTATTGATCATAAAATTGAGTTTA
AAAAGATTGAATATGTGTGTGAAATAAAAAGAGGTCAAGTATACTCTAAGGAATTTATTAATTCTAATAAAGGAAATTAT
CCAGTATATTCATCACAAAGTTTAAATGATGGTGTTTTAGGAAATATTAATAAATATGATTTTGATGGTGAATATGTTAC
TTGAACTACAGATGGTGCATATGCGGGAACTGTTTTCTATAGAAAAGGCAAATTTTCAATAACAAATGTGTGTGGAATAT
TAAAGGTGTTTGATAATTCTAATTAA

Upstream 100 bases:

>100_bases
TATTAAATTATTAAATATGCAAATTAAAGAAATTGTGGCTAAAATCGAAAAGTTAAGAAAAGAAATTGATGAAATTGTTT
TAGAATTAGAAGAATAAATT

Downstream 100 bases:

>100_bases
CAAACTTAAAAATATAAATTTATAAAGGGTTTATAAATATGGATAATAAAAAAGAAATTGAACGAAACAATTTACATGCA
ACAATTTGAAAAATTGCTGA

Product: type I restriction enzyme S protein (fragment)

Products: NA

Alternate protein names: S.MpnORFCP; Type I restriction enzyme specificity protein MPN_365; S protein [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNKIEKLINEFCPNGVEFKKLKNIITVAPKSPFGVTKLLKMEKGNYLTITSGKKSFYVDNFLVDGEYIFVNDGGQADIKY
NFGKTMYSDHIFAFKVNEYNTKYLYFYLLNISNFINKKLFIGSTLKNLNKKEFLNLAIPIPPISIQNKIVEILDKYTELE
TELETELETELELRNKQYIYYRNELLNFNKNQTLLKKIMDSDDIKSIDHKIEFKKIEYVCEIKRGQVYSKEFINSNKGNY
PVYSSQSLNDGVLGNINKYDFDGEYVTWTTDGAYAGTVFYRKGKFSITNVCGILKVFDNSN

Sequences:

>Translated_301_residues
MNKIEKLINEFCPNGVEFKKLKNIITVAPKSPFGVTKLLKMEKGNYLTITSGKKSFYVDNFLVDGEYIFVNDGGQADIKY
NFGKTMYSDHIFAFKVNEYNTKYLYFYLLNISNFINKKLFIGSTLKNLNKKEFLNLAIPIPPISIQNKIVEILDKYTELE
TELETELETELELRNKQYIYYRNELLNFNKNQTLLKKIMDSDDIKSIDHKIEFKKIEYVCEIKRGQVYSKEFINSNKGNY
PVYSSQSLNDGVLGNINKYDFDGEYVT*TTDGAYAGTVFYRKGKFSITNVCGILKVFDNSN
>Mature_301_residues
MNKIEKLINEFCPNGVEFKKLKNIITVAPKSPFGVTKLLKMEKGNYLTITSGKKSFYVDNFLVDGEYIFVNDGGQADIKY
NFGKTMYSDHIFAFKVNEYNTKYLYFYLLNISNFINKKLFIGSTLKNLNKKEFLNLAIPIPPISIQNKIVEILDKYTELE
TELETELETELELRNKQYIYYRNELLNFNKNQTLLKKIMDSDDIKSIDHKIEFKKIEYVCEIKRGQVYSKEFINSNKGNY
PVYSSQSLNDGVLGNINKYDFDGEYVT*TTDGAYAGTVFYRKGKFSITNVCGILKVFDNSN

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 34774; Mature: 34774

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIEKLINEFCPNGVEFKKLKNIITVAPKSPFGVTKLLKMEKGNYLTITSGKKSFYVDN
CCHHHHHHHHHCCCCCCHHHHCCEEEECCCCCCCHHHHHEECCCCEEEEECCCCEEEEEE
FLVDGEYIFVNDGGQADIKYNFGKTMYSDHIFAFKVNEYNTKYLYFYLLNISNFINKKLF
EEECCEEEEEECCCCEEEEEECCCEEECCEEEEEEECCCCCEEEEEEEEEHHHHHCCEEE
IGSTLKNLNKKEFLNLAIPIPPISIQNKIVEILDKYTELETELETELETELELRNKQYIY
ECHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YRNELLNFNKNQTLLKKIMDSDDIKSIDHKIEFKKIEYVCEIKRGQVYSKEFINSNKGNY
EEEEHHCCCCCHHHHHHHHCCCCHHHHHHHEEHEEEEEEEEECCCCCHHHHHHCCCCCCC
PVYSSQSLNDGVLGNINKYDFDGEYVTTTDGAYAGTVFYRKGKFSITNVCGILKVFDNSN
CEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHEEEEEECCCC
>Mature Secondary Structure
MNKIEKLINEFCPNGVEFKKLKNIITVAPKSPFGVTKLLKMEKGNYLTITSGKKSFYVDN
CCHHHHHHHHHCCCCCCHHHHCCEEEECCCCCCCHHHHHEECCCCEEEEECCCCEEEEEE
FLVDGEYIFVNDGGQADIKYNFGKTMYSDHIFAFKVNEYNTKYLYFYLLNISNFINKKLF
EEECCEEEEEECCCCEEEEEECCCEEECCEEEEEEECCCCCEEEEEEEEEHHHHHCCEEE
IGSTLKNLNKKEFLNLAIPIPPISIQNKIVEILDKYTELETELETELETELELRNKQYIY
ECHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YRNELLNFNKNQTLLKKIMDSDDIKSIDHKIEFKKIEYVCEIKRGQVYSKEFINSNKGNY
EEEEHHCCCCCHHHHHHHHCCCCHHHHHHHEEHEEEEEEEEECCCCCHHHHHHCCCCCCC
PVYSSQSLNDGVLGNINKYDFDGEYVTTTDGAYAGTVFYRKGKFSITNVCGILKVFDNSN
CEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]