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Identifier: 13357594

GI number: 13357594

Start: 40330

End: 41721

Strand: Direct

Name: Not Available

Synonym: UU038

Alternate gene names: 13357594

Gene position: 40330-41721 (Clockwise)

Preceding gene: 13357587

Following gene: 13357595

Centisome position: 5.37

GC content: 25.07

Gene sequence:

>1392_bases
GTGTTGAATTTAAAACAATATTTAGGTGAAACTAATTTTTATGATAAGAAAGAAAAATTAGAAAAGAAAAAAATAAAATC
ATGACTAAAAAGTGTTTGTACATTTGCTAATGGTCAAGGTGGCAAATTAATATTTGGTGTAAATGAAAACAATAATGTTT
TAGGATTAGAAAATTATTTAAATGATTCTGAATTTATTAGTGAAACTATTAAAACAAAAATTGATAATATTCCAGAATTT
GATATTGAAATTAATGAATACGAAAATAAAATTATTCTAATACTAACAATTTTTCCAGGAAGAAATCCACCATATTTTCT
AGTTGATAATGGTTCAAAAACTCCATATAAAAGAGTTGGTAATCAAAGTGTAATTGCTTCAATTAATGATTTATTAAATT
GATGTTTAAGAAGTCAAAATCGCACCTATGATTCATTAGTTTCTAATAAATTACTAAAAGATGTTAGTTTTTTAATGTTA
AAAAATGAATATCAAAAACATACAGAAAATTTATGAGAGGATAAATTTTTAAAATCCTTTGAATTAATTGATAACAATAA
TTACTTAACAAATGCTGGAGCTTTATTTGCTGATGGATATCAAGTTTATCAATCAGGAGTTTTTTGTACTCGTTGAAATG
GAAAGACTAAAACAAATGGTTTAATTGAAGCATTAGATGATGCAGAATTTGAAGGGAATTTACTATTTCTTTTAAATTCA
AGTATAAACTTTATTAAAAGAAATAGTAAAAACATGTGAAGAAAAGGAGTTTTATATCGTATTCAATATCCTGAATATCC
TATAAAAGCAGTGCAAGAAGTAATAGTTAATGCTTTGATTCATCGAGATTATTCAATTATTGGTAGTGAAGTACATATTG
ACATGTATGATGATAGATTAGAAGTATATTCTCCTGGTGGTATGTTTGATGGGAATTTTGTCCAAAATATCGACCTTTAT
AATGTATGATCAATTCGCCGTAATCCTATTTTAGCTGATTTATTTGCACGAATGAATTTAATGGAAAGAAGAGGTTCTGG
TTTAAAAAATATTTTAGAAATTTATGCATCTAAAGAAAATTATCGAGAAGATTTAAAACCGGAGTTTCGTTCAACTGAAT
CTGCTTTCTTTGTTGTTTTAAAAAATTTAAATTATCAAGAGCAAAATATATCAAAAAATGAAAATCAAAAAATATCCCCT
AGCCAAAGACGTAAAAAAATCATAGAATTTATCGGACAAAATCCAAAAACAACAGCTTATGAATTAACAAAAATATTTTT
TGTTTCAATTAATACCATTGAACGCGATCTAGCTAAATTAGTACATGATGGATATGTTGAATTTGTGGGATCATCAAAAA
ATGGTGAATGAAAAATTAAAACTAATCAATAA

Upstream 100 bases:

>100_bases
TAGTTTAAACTTTATTAATCACAATAATTTAGTATTTATCCAAAATTTTAATAACAATATTAGTAGTATAATGACTTGTA
AATAATACAAGGAGATTTTG

Downstream 100 bases:

>100_bases
ATCACGTTGTTAAAAAATTTTCTCTTCTTTAATCTTGTTATAATTCTTAGTTAGTAATAGTTTAGGTGGTTAAACGTGAA
AAAATATGATGTAATTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MLNLKQYLGETNFYDKKEKLEKKKIKSWLKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEF
DIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLNWCLRSQNRTYDSLVSNKLLKDVSFLML
KNEYQKHTENLWEDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTRWNGKTKTNGLIEALDDAEFEGNLLFLLNS
SINFIKRNSKNMWRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLY
NVWSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISP
SQRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGEWKIKTNQ

Sequences:

>Translated_463_residues
MLNLKQYLGETNFYDKKEKLEKKKIKS*LKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEF
DIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLN*CLRSQNRTYDSLVSNKLLKDVSFLML
KNEYQKHTENL*EDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTR*NGKTKTNGLIEALDDAEFEGNLLFLLNS
SINFIKRNSKNM*RKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLY
NV*SIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISP
SQRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGE*KIKTNQ
>Mature_463_residues
MLNLKQYLGETNFYDKKEKLEKKKIKS*LKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEF
DIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLN*CLRSQNRTYDSLVSNKLLKDVSFLML
KNEYQKHTENL*EDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTR*NGKTKTNGLIEALDDAEFEGNLLFLLNS
SINFIKRNSKNM*RKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLY
NV*SIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISP
SQRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGE*KIKTNQ

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 52432; Mature: 52432

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLKQYLGETNFYDKKEKLEKKKIKSLKSVCTFANGQGGKLIFGVNENNNVLGLENYLN
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCC
DSEFISETIKTKIDNIPEFDIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGN
HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHCCC
QSVIASINDLLNCLRSQNRTYDSLVSNKLLKDVSFLMLKNEYQKHTENLEDKFLKSFELI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE
DNNNYLTNAGALFADGYQVYQSGVFCTRNGKTKTNGLIEALDDAEFEGNLLFLLNSSINF
CCCCEEECCCCHHHCCHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHH
IKRNSKNMRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSP
HHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCEEEECC
GGMFDGNFVQNIDLYNVSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLK
CCCCCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCC
PEFRSTESAFFVVLKNLNYQEQNISKNENQKISPSQRRKKIIEFIGQNPKTTAYELTKIF
HHHCCCCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEE
FVSINTIERDLAKLVHDGYVEFVGSSKNGEKIKTNQ
EEEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLNLKQYLGETNFYDKKEKLEKKKIKSLKSVCTFANGQGGKLIFGVNENNNVLGLENYLN
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCC
DSEFISETIKTKIDNIPEFDIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGN
HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHCCC
QSVIASINDLLNCLRSQNRTYDSLVSNKLLKDVSFLMLKNEYQKHTENLEDKFLKSFELI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE
DNNNYLTNAGALFADGYQVYQSGVFCTRNGKTKTNGLIEALDDAEFEGNLLFLLNSSINF
CCCCEEECCCCHHHCCHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHH
IKRNSKNMRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSP
HHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCEEEECC
GGMFDGNFVQNIDLYNVSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLK
CCCCCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCC
PEFRSTESAFFVVLKNLNYQEQNISKNENQKISPSQRRKKIIEFIGQNPKTTAYELTKIF
HHHCCCCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEE
FVSINTIERDLAKLVHDGYVEFVGSSKNGEKIKTNQ
EEEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9603897 [H]