| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is rpmC [H]
Identifier: 15594831
GI number: 15594831
Start: 501012
End: 501212
Strand: Direct
Name: rpmC [H]
Synonym: BB0486
Alternate gene names: 15594831
Gene position: 501012-501212 (Clockwise)
Preceding gene: 15594830
Following gene: 15594832
Centisome position: 55.01
GC content: 27.36
Gene sequence:
>201_bases ATGTTGAAAAATTTCAAAAATTTTACTCTTGAGGACATGAAGGCTAAAAGGCTAGAATTAAAGAAAGAATATTTAGATTT AAGATTTAAATCTGTTGTTGGTCATGTTGAAAATCCTTTAAAGAAAAGAGAGATTAGACGTGATATTGCAAGGCTTAATA CAATGATTTGTGAATATGAATTAGGTATTAGAAAGGTTTAG
Upstream 100 bases:
>100_bases CAGGGGTTGTTGAGGAACTTGCTCAAGAGGCTATGTCGCTTGCAAGCTCTAAGCTTCCAGTAAAAACCATGTTTGTTGTA AGGCGAGATTTGAGGTAATT
Downstream 100 bases:
>100_bases ATATGGCAAGAGAAAATAAAAAAGAATTAATTGGTAAAGTTGTTAGTGATAAAATGTCTAAGACTATAGTAGTAGAAATT GTTCAAAGAAAGATGCATCC
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MLKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYELGIRKV
Sequences:
>Translated_66_residues MLKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYELGIRKV >Mature_66_residues MLKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYELGIRKV
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 8011; Mature: 8011
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGIRKV CCCCCC >Mature Secondary Structure MLKNFKNFTLEDMKAKRLELKKEYLDLRFKSVVGHVENPLKKREIRRDIARLNTMICEYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGIRKV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA