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The map label for this gene is ymdB [H]

Identifier: 15594816

GI number: 15594816

Start: 489733

End: 490554

Strand: Direct

Name: ymdB [H]

Synonym: BB0471

Alternate gene names: 15594816

Gene position: 489733-490554 (Clockwise)

Preceding gene: 15594815

Following gene: 15594817

Centisome position: 53.77

GC content: 28.59

Gene sequence:

>822_bases
GTGTCTTTAAGGATTTTAATTACTGGCGAGGTTGTCGGCAAAGCTGGGATTATTGTTATAAAATCTTTTTTATCATCCTT
TAAGGTGGAAAAAAAGATTGATTTTGTAATATCTGGCAATAATTTTACTACAGGTTTAAGAGGTCTTGGCAAAAAGCATG
CCTTTTTATTAAAAAAGTATGGAATTGATGTTTTAACTTTAGGTGAAAATGCTTTTGCAAGGCCTGATTTATCTGATGAT
CTTGATAAGTATAATTTTATTTTAAAGCCTTTAAATTGTCCTGCAAAATTAAAGGGATATTCTTATTTTATTTATAATAT
TAATGGCAAAAAATTGGCTGTGATTAGAATTGTAGGTCAAACAGGAATAACTAAATATAAATTTAATCATCCTTTTTATA
GTTTTGATTTTTTTTATCAAAGAATCAAGATGCAAACAAATAATATTATTGTTCTTTTTGATTCAAATACTACAGCCGAA
GTTAATGCTTTGTTTTTTTATCTAAAATCAAGAGTTAGTGCTTGTCTTGGAACCGGGAAAAGGATTTTAACAGCTGATTT
GAGAATTTTAGATAATACTGCTATTATAACTGATTTGGGCAGAGTTGGGAGTTTGGACAGTGTTATTGGATATTCTCCTG
ATTTAGAGGTGGATAAATTTTTGAAAGGATTTTTAAATCAGAAATTTAATGAATCTTGGGAAGGCCTTGGTTTTAACGGT
GTTTTAATTGATATCGATGAGAATGGCCATTCTTTTTCTGTAGAGATTGTTAGAGAATATATAGATTGTAAATCAAGTTT
AAAAGATATGGATATTGTTTGA

Upstream 100 bases:

>100_bases
ATTGTTTTCGCTGTTTTGGTGGGGTATTTTGTGTCAATTTTTATTGTAAAAAGTTTACTTATTAAGTTGTTTGAACTAGA
TCAATAAAAAGAGAGGCTTT

Downstream 100 bases:

>100_bases
TATTCATATCTTTAGATATTCTTTAAATTTTAATAATCTTATCTGTGCGATTTAATTTTATTAAGTTTTTATATATAGGA
GGATGGATTATGCATAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSLRILITGEVVGKAGIIVIKSFLSSFKVEKKIDFVISGNNFTTGLRGLGKKHAFLLKKYGIDVLTLGENAFARPDLSDD
LDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVIRIVGQTGITKYKFNHPFYSFDFFYQRIKMQTNNIIVLFDSNTTAE
VNALFFYLKSRVSACLGTGKRILTADLRILDNTAIITDLGRVGSLDSVIGYSPDLEVDKFLKGFLNQKFNESWEGLGFNG
VLIDIDENGHSFSVEIVREYIDCKSSLKDMDIV

Sequences:

>Translated_273_residues
MSLRILITGEVVGKAGIIVIKSFLSSFKVEKKIDFVISGNNFTTGLRGLGKKHAFLLKKYGIDVLTLGENAFARPDLSDD
LDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVIRIVGQTGITKYKFNHPFYSFDFFYQRIKMQTNNIIVLFDSNTTAE
VNALFFYLKSRVSACLGTGKRILTADLRILDNTAIITDLGRVGSLDSVIGYSPDLEVDKFLKGFLNQKFNESWEGLGFNG
VLIDIDENGHSFSVEIVREYIDCKSSLKDMDIV
>Mature_272_residues
SLRILITGEVVGKAGIIVIKSFLSSFKVEKKIDFVISGNNFTTGLRGLGKKHAFLLKKYGIDVLTLGENAFARPDLSDDL
DKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVIRIVGQTGITKYKFNHPFYSFDFFYQRIKMQTNNIIVLFDSNTTAEV
NALFFYLKSRVSACLGTGKRILTADLRILDNTAIITDLGRVGSLDSVIGYSPDLEVDKFLKGFLNQKFNESWEGLGFNGV
LIDIDENGHSFSVEIVREYIDCKSSLKDMDIV

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30684; Mature: 30553

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRILITGEVVGKAGIIVIKSFLSSFKVEKKIDFVISGNNFTTGLRGLGKKHAFLLKKY
CEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHH
GIDVLTLGENAFARPDLSDDLDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVIRIVGQ
CCEEEEECCCCCCCCCCCCCHHHCEEEEEECCCCCEECCEEEEEEEECCCEEEEEEEECC
TGITKYKFNHPFYSFDFFYQRIKMQTNNIIVLFDSNTTAEVNALFFYLKSRVSACLGTGK
CCCEEEEECCCEEHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
RILTADLRILDNTAIITDLGRVGSLDSVIGYSPDLEVDKFLKGFLNQKFNESWEGLGFNG
EEEEEEEEEECCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VLIDIDENGHSFSVEIVREYIDCKSSLKDMDIV
EEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLRILITGEVVGKAGIIVIKSFLSSFKVEKKIDFVISGNNFTTGLRGLGKKHAFLLKKY
EEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHH
GIDVLTLGENAFARPDLSDDLDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVIRIVGQ
CCEEEEECCCCCCCCCCCCCHHHCEEEEEECCCCCEECCEEEEEEEECCCEEEEEEEECC
TGITKYKFNHPFYSFDFFYQRIKMQTNNIIVLFDSNTTAEVNALFFYLKSRVSACLGTGK
CCCEEEEECCCEEHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
RILTADLRILDNTAIITDLGRVGSLDSVIGYSPDLEVDKFLKGFLNQKFNESWEGLGFNG
EEEEEEEEEECCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VLIDIDENGHSFSVEIVREYIDCKSSLKDMDIV
EEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]